DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kap-alpha1 and ABAP1

DIOPT Version :9

Sequence 1:NP_524167.1 Gene:Kap-alpha1 / 40160 FlyBaseID:FBgn0024889 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_196810.5 Gene:ABAP1 / 831145 AraportID:AT5G13060 Length:737 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kap-alpha1NP_524167.1 SRP1 1..543 CDD:227396
IBB 3..116 CDD:280005
ARM 131..252 CDD:237987
armadillo repeat 133..165 CDD:293788
armadillo repeat 173..209 CDD:293788
armadillo repeat 215..250 CDD:293788
ARM 264..378 CDD:237987
armadillo repeat 267..292 CDD:293788
armadillo repeat 300..336 CDD:293788
armadillo repeat 342..376 CDD:293788
ARM 356..461 CDD:237987
armadillo repeat 384..421 CDD:293788
armadillo repeat 427..461 CDD:293788
Arm_3 473..517 CDD:292804
ABAP1NP_196810.5 SRP1 17..440 CDD:227396
armadillo repeat 117..160 CDD:293788
armadillo repeat 221..252 CDD:293788
armadillo repeat 260..296 CDD:293788
armadillo repeat 302..333 CDD:293788
armadillo repeat 344..378 CDD:293788
armadillo repeat 385..416 CDD:293788
HEAT repeat 423..459 CDD:293787
armadillo repeat 500..534 CDD:293788
BTB_POZ_ARIA_plant 555..670 CDD:349661
BACK 664..727 CDD:421692
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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