DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment verm and serp

DIOPT Version :10

Sequence 1:NP_001163469.1 Gene:verm / 40149 FlyBaseID:FBgn0261341 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_320597.3 Gene:serp / 1280733 VectorBaseID:AGAMI1_005043 Length:537 Species:Anopheles gambiae


Alignment Length:520 Identity:309/520 - (59%)
Similarity:398/520 - (76%) Gaps:9/520 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RYQRKPHGQDKLEGVDVEEVCADRPADEYFRLET-DGD-CREVYRCDSAGEDGTWRLAPIRCAGG 99
            |.:|:.....|.|....:|:|.|:.|.|:|||.. :|| ||:|.:|.|:|      |..|||..|
Mosquito    23 RIKRQAEETTKKEESFEKELCKDKDAGEWFRLVAGEGDNCRDVIQCTSSG------LQAIRCPAG 81

  Fly   100 LAFDVLRQLCDWKSNVKSCDVLEKPRKAKPILKTDEPICPEGKLSCGDGECLDKELFCNGKSDCK 164
            |.||:.:|.||||..||:|....|.||.||:|.||||:|.:|.|:||||.|:::.|||||:.||.
Mosquito    82 LYFDIEKQTCDWKDAVKNCKFKNKERKVKPLLITDEPLCQDGFLACGDGNCIERGLFCNGEKDCS 146

  Fly   165 DESDENACSVDEDPNRAPECDPTQCALPDCFCSADGTRIPGGIEPQQVPQMITITFNGAVNVDNI 229
            |.||||:|.::.||||||.||.:.|.|||||||.|||.|||.:..:.||.||||||:.|:|.:||
Mosquito   147 DGSDENSCDIENDPNRAPPCDESVCQLPDCFCSEDGTTIPGSLPAKDVPMMITITFDDAINNNNI 211

  Fly   230 DLYEDIFNGQRQNPNGCSIKGTFFVSHKYTNYSAVQDLHRRGHEISVFSLTHKDDPNYWTGGSYD 294
            |||::||||:|:|||||.||.|:|||||||||||||:.||:||||:|.|:||.||..:|:..:.|
Mosquito   212 DLYKEIFNGKRKNPNGCDIKATYFVSHKYTNYSAVQETHRKGHEIAVHSITHNDDERFWSNATVD 276

  Fly   295 DWLAEMAGSRLIVERFANITDGSIIGMRAPYLRVGGNKQFEMMADQFFVYDASITASLGRVPIWP 359
            ||..||||.|:|:|::|||||.|::|:||||||||||.||.||.:|.|:||::|||.|...|:||
Mosquito   277 DWAKEMAGMRIIIEKYANITDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTITAPLSNPPLWP 341

  Fly   360 YTLYFRMPHKCNGNAHNCPSRSHPVWEMVMNELDRRDDPTFDESLPGCHMVDSCSNVASGDQFAR 424
            ||:||||||:|:||..:||:|||.||||||||||||:|||.||.||||.|||||||:.:||||..
Mosquito   342 YTMYFRMPHRCHGNLQSCPTRSHAVWEMVMNELDRREDPTNDEYLPGCAMVDSCSNILTGDQFYN 406

  Fly   425 LLRHNFNRHYNSNRAPLGLHFHASWLKSKKEYRDELIKFIEEML-GRNDVFFVTNLQVIQWMQNP 488
            .|.|||:|||:.|||||||:|||:|||:..|:.|..:.:|:|:| ..|||:|||..|||||:|||
Mosquito   407 FLNHNFDRHYDQNRAPLGLYFHAAWLKNNPEFLDAFLYWIDEVLANHNDVYFVTMTQVIQWIQNP 471

  Fly   489 TELNSLRDFQEWKEKCDVKGQPYCSLPNACPLTTRELPGETLRLFTCMECPNNYPWILDPTGDGF 553
            ...|.:::|:.|:|||.|:|||.|.:|::|.||::|:||||:.|.||:.|||||||:.|||||||
Mosquito   472 RTTNEVKNFEPWREKCVVEGQPACWVPHSCKLTSKEVPGETINLQTCVRCPNNYPWVNDPTGDGF 536

  Fly   554  553
            Mosquito   537  536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vermNP_001163469.1 CBM_14 57..118 CDD:426342 30/62 (48%)
LDLa 138..172 CDD:238060 20/33 (61%)
CE4_CDA_like_1 213..488 CDD:200596 180/275 (65%)
serpXP_320597.3 CBM_14 43..100 CDD:426342 30/62 (48%)
LDLa 120..154 CDD:238060 20/33 (61%)
CE4_CDA_like_1 195..471 CDD:200596 180/275 (65%)

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