DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lon and lon1

DIOPT Version :9

Sequence 1:NP_730435.2 Gene:Lon / 40138 FlyBaseID:FBgn0036892 Length:1024 Species:Drosophila melanogaster
Sequence 2:NP_593035.1 Gene:lon1 / 2541875 PomBaseID:SPAC22F3.06c Length:1067 Species:Schizosaccharomyces pombe


Alignment Length:1038 Identity:445/1038 - (42%)
Similarity:628/1038 - (60%) Gaps:131/1038 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 NRPIQSSLMQYCRDRSLRLQRLHGANLMVQRFYS--RKRDDSNGDIIMGPDLMSDQ-------DT 79
            |..:.|:..:..:|.....|.|..::...:..||  :.....|.:..:|.:...|:       :.
pombe    83 NESLPSTDKKKKKDNDDFKQNLKSSSNKTEEKYSATQASKSKNDEFELGGEENEDEMPLNGEFNK 147

  Fly    80 HLPATVAVPDVWPHVPLLAMRKNPLFPRFMKIVEVSNPIIMDLLRRKVKLNQPYVGVFLKKTDG- 143
            ::||..:||||:|.:..|.:.:.||||.|.|.:...||.:.:.::..:|..|||:|.||.|.:. 
pombe   148 NVPAKYSVPDVYPQLLALPIARRPLFPGFYKAIVTKNPSVSEAIKELIKKRQPYIGAFLLKDENT 212

  Fly   144 EEELITNLNDVYNLGTFAQIQEL--QDLGDK--LRMVVVAHRRIRITGQVVEDVPPPKPVKMTTL 204
            :.::|||::.||.:|.||||..:  ...|.:  |..|:..|||||||     ::.|||       
pombe   213 DTDVITNIDQVYPVGVFAQITSIFPAKSGSEPALTAVLYPHRRIRIT-----ELIPPK------- 265

  Fly   205 HYPLFNIKLQIPAED-QSTDQADAAPIKSRSDPARKPRGRIPRSRTGKSRESAAAEELIQNQTLE 268
                         || .|...:|||.::                 |.||      ..|..|..::
pombe   266 -------------EDADSAASSDAAELE-----------------TDKS------SNLSSNGEVK 294

  Fly   269 PPLK--SGKVESSSLPKPPTEEKIVEPETGAKENVNQSAPSAQPVLIVEVENV-KQPIYKQTEEV 330
            ..||  :||.|         .||.||......:|..        |.:|.|||| .:|..:|...:
pombe   295 SDLKQDNGKEE---------PEKEVESTPSILQNFK--------VSLVNVENVPNEPFKRQDPVI 342

  Fly   331 KALTQEIIKTLRDIITMNPLYRESLQ--QMLHQNQRVVDNPIYLCDLGASLSAGEPAELQKILEE 393
            ||:|.||:...:||..::||:||.:.  .:...:..|.|.|..|.|..|::||.:..|||::||.
pombe   343 KAVTSEIMNVFKDIANVSPLFREQIANFSISQTSGNVFDEPAKLADFAAAVSAADHRELQEVLEA 407

  Fly   394 TDIPERLQLALTLLKKELELSRLQQKIGREVEEKVKQQHRKYILQEQLKVIKKELGIEKDDKDAI 458
            |:|.:|||.||.:|||||..::||.||.:|:|:|:.|:|::|:|.||||.||:|||.|.|.|:|:
pombe   408 TNIGDRLQKALYVLKKELLNAQLQHKINKEIEQKITQRHKEYLLTEQLKQIKRELGQELDSKEAL 472

  Fly   459 GEKYREKLKDKVVPEAIMTVIDEELTKLNFLESHSSEFNVTRNYLDWLTSLPWGVISTENLCLEK 523
            ..:::::.:...:|:.:..|.::||:|...||..::|||:|||||||:|.||||..|.||..|:.
pombe   473 VTEFKKRTESLSMPDHVKKVFNDELSKFQHLEPMAAEFNITRNYLDWITQLPWGKRSVENFDLDH 537

  Fly   524 ATETLNDDHYGMEDIKKRILEFIAVSSLKGSTQGKILCFHGPPGVGKTSIAKSIARALNREYFRF 588
            |.|.|:.||||::|:|.|:||.:||..|:|:.||||:|..|||||||||:.||||.|||||:|||
pombe   538 AKEVLDRDHYGLKDVKDRVLELVAVGKLRGTMQGKIMCLVGPPGVGKTSVGKSIASALNREFFRF 602

  Fly   589 SVGGMTDVAEIKGHRRTYVGAMPGKLIQCLKKTKIENPLVLIDEVDKIGKGYQGDPSSALLELLD 653
            ||||:|||||||||||||:||||||::|.|||.:.||||:||||:||:||.:||||:||||||||
pombe   603 SVGGLTDVAEIKGHRRTYIGAMPGKIVQALKKVQTENPLILIDEIDKVGKSHQGDPASALLELLD 667

  Fly   654 PEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLRDRMELIEMSGYVAEEKIAIARQYLMPQ 718
            .|||:.|||:|:|:|:|:|.|||:||||.|||||.||.||||:||:||||:.||:.||:.||:||
pombe   668 SEQNSAFLDYYMDIPLDVSSVLFVCTANTIDTIPPPLLDRMEVIELSGYVSAEKVNIAKGYLIPQ 732

  Fly   719 AMKDCGLTDKHINISEDALNMLIRSYCRESGVRNLQKHIEKVIRKVAFRVVK------------- 770
            |...|||.|.::|||:||:..||..|..|||||||:|.|||:.||.:|.:||             
pombe   733 AKAACGLKDANVNISDDAIKGLISYYAHESGVRNLKKSIEKIFRKTSFSIVKEIDDELNSKEKST 797

  Fly   771 -----------------KEGEHFP------VNAD----NLTTFLGKQIFSSDRMYATTPVGVVMG 808
                             ||....|      ||.:    :||.:||..|::|.|:|.|||.|||||
pombe   798 GKSGKKTSPQSSEDAANKEASSVPLKVPDKVNIEIEEKDLTKYLGPPIYTSQRLYDTTPPGVVMG 862

  Fly   809 LAWTAMGGSSLYIETSRRHIRQGAKTDPNTVAGSLHITGNLGDVMKESAQIALTVARNFLYSLEP 873
            |.||.|||.|:|:||..::|.....|.      ||..||.||||||||::|:.:.:::||....|
pombe   863 LGWTPMGGVSMYVETIVKNILSSNSTP------SLERTGQLGDVMKESSEISYSFSKSFLSKHFP 921

  Fly   874 NNLFLEQEHIHLHVPEGATPKDGPSAGITIITALVSLATGKPVRQDIAMTGEVSLKGKVLPVGGI 938
            ||.|.|...:|:|.|||:..|||||||||:.|:|:|||...||....|||||::|.||:|.:||:
pombe   922 NNKFFEHARLHMHCPEGSISKDGPSAGITMATSLLSLALDTPVPATTAMTGELTLTGKILRIGGL 986

  Fly   939 KEKTIAARRSGVNCLILPVDNKKDFEELPTYITDGLEVHFATTYEDVYKIAFTDVTETTTNNV 1001
            :|||:||:.||:..::.|..|..|:|:||.|:.:||.......|:||:|..|:::.....||:
pombe   987 REKTVAAKLSGMKEILFPKSNLADWEQLPDYVKEGLTGVPVAWYDDVFKRVFSNIDAEKCNNL 1049

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LonNP_730435.2 LON 93..>148 CDD:197740 17/55 (31%)
lon 95..990 CDD:273258 425/945 (45%)
P-loop_NTPase 530..>581 CDD:304359 31/50 (62%)
AAA 560..702 CDD:278434 105/141 (74%)
ChlI 778..991 CDD:304493 102/216 (47%)
lon1NP_593035.1 LON 161..>217 CDD:197740 17/55 (31%)
lon 163..1038 CDD:273258 425/945 (45%)
AAA 574..716 CDD:278434 105/141 (74%)
ChlI 832..1035 CDD:304493 99/208 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 225 1.000 Domainoid score I531
eggNOG 1 0.900 - - E1_COG0466
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3521
Inparanoid 1 1.050 777 1.000 Inparanoid score I77
OMA 1 1.010 - - QHG55281
OrthoFinder 1 1.000 - - FOG0002884
OrthoInspector 1 1.000 - - oto102128
orthoMCL 1 0.900 - - OOG6_100411
Panther 1 1.100 - - LDO PTHR43718
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R662
SonicParanoid 1 1.000 - - X2242
TreeFam 1 0.960 - -
1413.860

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