DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ash1 and Nsd2

DIOPT Version :10

Sequence 1:NP_524160.2 Gene:ash1 / 40133 FlyBaseID:FBgn0005386 Length:2226 Species:Drosophila melanogaster
Sequence 2:NP_001178481.2 Gene:Nsd2 / 680537 RGDID:1307955 Length:1365 Species:Rattus norvegicus


Alignment Length:1504 Identity:321/1504 - (21%)
Similarity:507/1504 - (33%) Gaps:469/1504 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 GQTVNAKLAEE---KVAKAKEETLVQTAVPRKRRGRPKKVVPTVPAPG---------NSGPAINE 286
            |:|.|.::..|   .::||:....:|..|.:|..|.  ..:|.:||..         |..|..::
  Rat    33 GKTQNCEVNHECSVFLSKAQLSNSLQEGVMQKFNGH--DALPFLPAEKLKDLTSCVFNGEPGAHD 95

  Fly   287 SA---DSGVISTTSTTQSTTPSPKMQNENAVPTGSLPIASSSKPKIDMAYLDKRMYATERVLYPP 348
            :.   ::..:....|..:|||         :..||..|    |.||...|:              
  Rat    96 TKLCFETQEVKGIGTPPNTTP---------IKNGSPEI----KLKITKTYM-------------- 133

  Fly   349 PRSKRRQNNKKTACSSSNKEELQLDPLWREIDVNKKFRLRSMSVGAASGTGASTTICSKVLAAKS 413
                   |.|               ||:.               .:..|.||:....|:    ::
  Rat   134 -------NGK---------------PLFE---------------SSICGDGAADMSQSE----EN 157

  Fly   414 GYVSDYGSVRHQRSSHNHNSGYKS---DASCKSRYSTKSCMSRRSRAKSCGYRSDCKESGKSGLR 475
            |..||..:.|:::.|..::|..:.   :|:..|:.|:..  .::...|    :..|..||     
  Rat   158 GQKSDNKTRRNRKRSIKYDSLLEQGLVEAALVSKISSPE--DKKIPVK----KESCPNSG----- 211

  Fly   476 MRRKRRASMLLKSSADDTVEDQDILQLAGLSLGQSSEESNEYISKPSLKSLPTTSASKKYGEINR 540
                |...:|||.:..|.|..    :::|.........::     |.|.:.......||  ...:
  Rat   212 ----RDRDLLLKYNVGDLVWS----KVSGYPWWPCMVSAD-----PLLHNHTKLKGQKK--SARQ 261

  Fly   541 YVTTGQYFGRG--------GSLSATNPDNFISKMMNQRKETPAPSKSSCKIKSRRSSAASMCSSY 597
            |..  |:||..        .||.|...:....|:. |.....||:|:. |||..:..:..:.:.:
  Rat   262 YHV--QFFGDAPERAWIFEKSLVAFEGEEQFEKLC-QESAKQAPTKAE-KIKLLKPISGRLRAQW 322

  Fly   598 VSGV------SRMRRRHRRKSFSH---NKSLNIDSKLLTEIEIIT---------STFNSRCRI-- 642
            ..|:      :.|....|:..|:.   ...|.::.::..|..|.|         |..|....:  
  Rat   323 EMGIVQAEEAASMSVEERKAKFTFLYVGDQLRLNPQVAKEAGIATEPLGEMVDSSVANEEAAVDP 387

  Fly   643 ----QDD-------RLTGSSGKEKLLADANKLQAT---LAAPSPAQQLTLNGGGPASTLSKPLKR 693
                ::|       |...||..|....|....::|   :|...|.:.:....|...||.|....|
  Rat   388 GTMREEDIPVKRRRRAKRSSSAENQEGDPGTEKSTPPKMADAEPKRGVGSPAGRKRSTGSASRSR 452

  Fly   694 ------------------------GLKKRKLSEPL-VDFAMLSASASGTPN---------GSGSS 724
                                    ...:.::.|.| ..::||:.......|         .|...
  Rat   453 KGDSAAQFLVFCQKHRDEVVAEHPDASEEEIEELLGSQWSMLNEKQKARYNTKFSLMISAQSEED 517

  Fly   725 NGNT---KRRHKKSQSNDSSSPDDHKLPLKK----RHYLLTPGERPPAEVAFANGKLNAEAWAAA 782
            :|||   ||.|.|...:.....|....|.|:    :|.|     |....:.....:.::.....|
  Rat   518 SGNTSGKKRTHTKRTDDPPEDVDVEDAPRKRLRTDKHSL-----RKRETITDKTARTSSYKAIEA 577

  Fly   783 AAAAKSTASTKSQAQFNARSVKSALTPKKRHLLEQPTSVSGAGSSASNSPLRIVVDNN-SISGGK 846
            |::.||.|:||        ::..|..|.|:......|:.|..|.:.|:||...:.:|. |.:.|.
  Rat   578 ASSLKSQAATK--------NLSDACKPLKKRNRASATASSALGFNKSSSPSASLTENEVSDNPGD 634

  Fly   847 LLDISP---------SSLCSLKQQRRGGAAKQKVSAAKDLVQLQSPAGSY-----PPPGVFEPSV 897
            ....||         .:..|.|:..||.|||::.     :.||....||.     |..|.|..:.
  Rat   635 EPSESPYESADETQTEASVSSKKSERGMAAKKEY-----VCQLCEKTGSLLLCEGPCCGAFHLAC 694

  Fly   898 ELEIQIPLSKLNESVITKAEVESPLLSALDIKEDTKKEVGQRVVETLLHKTGGNLLLKRKRKKIN 962
                 :.||:..|...|..|..|.:.|....|| :|.||                    ||..:|
  Rat   695 -----LGLSQRPEGRFTCTECASGIHSCFVCKE-SKMEV--------------------KRCMVN 733

  Fly   963 RTGFPTVRRKKRKVSVEQQTTAVIDEHEPEFDPDDEPLQSLRETRSSNNVNVQAAPNPPLDCERV 1027
            :.|     :...:..|::....|.:......     ||.|.....:||..|.:.:....:.|.|.
  Rat   734 QCG-----KFYHEACVKKYPLTVFESRGFRC-----PLHSCMSCHASNPSNPRPSKGKMMRCVRC 788

  Fly  1028 PQAGEARETFVARTNQKAPRLSVVALERLQRPQTPARGRPRGRKPKNR----------------- 1075
            |.|....:..:      |...||:|...:     ...|....||.|..                 
  Rat   789 PVAYHGGDACL------AAGCSVIASNSI-----ICTGHFTARKGKRHHTHVNVSWCFVCSKGGS 842

  Fly  1076 ----EQAEAAPQPPPKSEPEIRPAKKRGRQPKQPVLEEPPPTPPPQQKKNKMEPNIRLPDGIDPN 1136
                |...||..|...|                                      |.:|||    
  Rat   843 LLCCEACPAAFHPDCLS--------------------------------------IEMPDG---- 865

  Fly  1137 TNFSCKIRLKRRKNLEAGTQPKKEK------------PVQPVTVEEIPPEIPVSQEEIDAEAEAK 1189
             ::.|       .:..||.:...:.            |.:....:.:||.|...:.||       
  Rat   866 -SWFC-------NDCRAGKKLHFQDIIWVKLGNYRWWPAEVCHPKNVPPNIQKMKHEI------- 915

  Fly  1190 RLDSIPTEHDPLPASESHNP----GPQDYASCSES------SEDKAST-TSLRKLSKVKKTYLVA 1243
                            ...|    |.:||....::      ..|:.|. ..:|.:.:|       
  Rat   916 ----------------GEFPVFFFGSKDYYWTHQARVFPYMEGDRGSRYQGVRGIGRV------- 957

  Fly  1244 GLFSNHYKQSLMPPPAKVNK-KPGLEEQVGPASLLPPPPYCEKYLRRTEMDFELPYDIWWAYTNS 1307
                  :|.:|....|:.|: |...|.:....|...||||  |:::..:     ||.        
  Rat   958 ------FKNALQEAEARFNEIKLQREARETQESERKPPPY--KHIKVNK-----PYG-------- 1001

  Fly  1308 KLPTRNVVPSWNYRKIRTNVYAESVRPNLAGFDHPTCNCKNQGEKSCLDN--CLNRMVYTECSPS 1370
                            :..:|...:.      :.|.||||...|..|..:  |||||:..||.|.
  Rat  1002 ----------------KVQIYTADIS------EIPKCNCKPTDENPCGSDSECLNRMLMFECHPQ 1044

  Fly  1371 NCPAGEKCRNQKIQRHAVAPGVERFMTADKGWGVRTKLPIAKGTYILEYVGEVVTEKEFKQRMAS 1435
            .|||||.|:||...:... |..:...|..||||:..|..|.||.::.|||||::.|:|...|:..
  Rat  1045 VCPAGEYCQNQCFTKRQY-PETKIIKTDGKGWGLVAKRDIRKGEFVNEYVGELIDEEECMARIKY 1108

  Fly  1436 IYLND-THHYCLHLDGGLVIDGQRMGSDCRFVNHSCEPNCEMQKWSVNGLSRMVLFAKRAIEEGE 1499
            .:.|| ||.|.|.:|...:||....|:..||:||||:||||..||:|||.:|:.|||...|..|.
  Rat  1109 AHENDITHFYMLTIDKDRIIDAGPKGNYSRFMNHSCQPNCETLKWTVNGDTRVGLFAVCDIPAGT 1173

  Fly  1500 ELTYDYNFSLFNPSEGQPCRCNTPQCRGVIGGKSQRVKPLPAVEAKPSGEGLSGRNGRQRKQKAK 1564
            |||::||..... :|...|||....|.|.:|.:       |......|.|        ::.:|||
  Rat  1174 ELTFNYNLDCLG-NEKTVCRCGASNCSGFLGDR-------PKTSTSLSSE--------EKSKKAK 1222

  Fly  1565 KHAQRQAGK 1573
            |..:|:..|
  Rat  1223 KKTRRRRAK 1231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ash1NP_524160.2 PHA03247 <1018..1281 CDD:223021 46/307 (15%)
AWS 1340..1388 CDD:197795 23/49 (47%)
SET_ASH1L 1391..1531 CDD:380951 59/140 (42%)
Bromo_ASH1 1680..1787 CDD:99955
PHD_ASH1L 1858..1900 CDD:277023
BAH_polybromo 1929..2073 CDD:240068
Nsd2NP_001178481.2 PWWP_NSD2_rpt1 220..347 CDD:438990 26/141 (18%)
HMG-box_NSD2 452..507 CDD:438807 6/54 (11%)
TNG2 <546..710 CDD:227367 43/186 (23%)
PHD1_NSD1_2 669..711 CDD:277118 12/46 (26%)
PHD_SF 716..762 CDD:473978 13/76 (17%)
PHD3_NSD2 763..816 CDD:277124 12/63 (19%)
PHD_SF 833..873 CDD:473978 10/89 (11%)
PWWP_NSD2_rpt2 879..974 CDD:438993 18/130 (14%)
AWS 1012..1062 CDD:197795 23/49 (47%)
SET_NSD2 1062..1203 CDD:380988 60/142 (42%)
PHD5_NSD2 1241..1283 CDD:277130
C5HCH 1282..1327 CDD:465605
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.