DRSC/TRiP Functional Genomics Resources

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Protein Alignment ash1 and set-13

DIOPT Version :10

Sequence 1:NP_524160.2 Gene:ash1 / 40133 FlyBaseID:FBgn0005386 Length:2226 Species:Drosophila melanogaster
Sequence 2:NP_494371.1 Gene:set-13 / 173626 WormBaseID:WBGene00019690 Length:402 Species:Caenorhabditis elegans


Alignment Length:496 Identity:104/496 - (20%)
Similarity:169/496 - (34%) Gaps:157/496 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1128 RLPDGIDPNTN-----FSCKIRLKRRKN------LEAGTQPKKEKPVQPVTVEEIPPEIPVSQEE 1181
            ||....|.|.:     ||.|:..:..::      :...||||.|:          .|.|||::..
 Worm    12 RLTTFTDSNISPTSLIFSSKMSSRTLRSSSSSNAISTKTQPKTEE----------APLIPVTKGP 66

  Fly  1182 IDAEAEAKRLDSIPTEHDPLPASESHNPGPQDYASCSESSEDKASTTSLRKLSKVKKTYLVAGLF 1246
            : ....:...|....:|...|::....   ..:.:......:|::..::|:..|::         
 Worm    67 V-IRMTSNMADKAQNDHSMWPSTSKFE---SIWGNVLGERVNKSTIAAIREGMKIE--------- 118

  Fly  1247 SNHYKQSLMPPPAKVNK-----KPGLEEQVGPASLLPPPPYCEKYLRRTEMDFELPYDIWWAYTN 1306
                           ||     :||.:....||        |..:...:.:......||   .|.
 Worm   119 ---------------NKVTCGCRPGQDCSTNPA--------CRCFQTASRLREHFGSDI---LTR 157

  Fly  1307 SKLPTRNV-VPSWNYRKIRTNVYAESVRPNLA--GFDHPTCNCKNQGEKSCLDNCLNRMVYTECS 1368
            .| |.:.| ...|:             ||..|  |    :|.||.|    |..|.|..:    |.
 Worm   158 GK-PVKTVDTMYWD-------------RPMFACSG----SCGCKGQ----CNLNALQDI----CE 196

  Fly  1369 PSNCPAGEKCRNQKIQRHAVAPGVERFMTADKGWGVRTKLPIAKGTYILEYVGEVV------TEK 1427
                   :..:..||.|           |..||:.|.:...|.||:.:||:.||:.      :..
 Worm   197 -------DPAKKFKITR-----------TDGKGFCVYSARVIKKGSPVLEFSGEITDYLAIKSNA 243

  Fly  1428 EFKQRMASIYLNDTHHYC--LHLDGGLV----------------IDGQRMGSDCRFVNHSCEPNC 1474
            :.:|....:|.|:| ..|  ...:..|.                |:....|:..||.:|.|:.|.
 Worm   244 DIEQYSIMLYNNET-KLCDFFSKEENLSSKYKKILWSAYRSKAWINPLNRGNCARFFSHGCKANM 307

  Fly  1475 EMQKWSVNGLS----RMVLFAKRAIEEGEELTYDYNFSLFNPSEGQPCRCNTPQCRGVIGGKSQR 1535
            |:.:....|.|    ::|||||..|:.|.|||::|..|......|..|.|..  |      |.:.
 Worm   308 ELGRVFQGGFSPADMKIVLFAKEIIKPGTELTFNYGPSYKEIFLGNKCLCEA--C------KKEA 364

  Fly  1536 VKPLPAVEAKPSGEGLSGRNGRQRKQ--KAKKHAQRQAGKD 1574
            ||.|.....:..      :|.|...:  ..||..::..||:
 Worm   365 VKKLENAVKRIL------KNSRDPSEPPSKKKSVKKLDGKE 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ash1NP_524160.2 PHA03247 <1018..1281 CDD:223021 28/168 (17%)
AWS 1340..1388 CDD:197795 11/47 (23%)
SET_ASH1L 1391..1531 CDD:380951 43/167 (26%)
Bromo_ASH1 1680..1787 CDD:99955
PHD_ASH1L 1858..1900 CDD:277023
BAH_polybromo 1929..2073 CDD:240068
set-13NP_494371.1 SET 200..348 CDD:214614 42/159 (26%)
Blue background indicates that the domain is not in the aligned region.

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