DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and KCO6

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_193550.1 Gene:KCO6 / 827541 AraportID:AT4G18160 Length:436 Species:Arabidopsis thaliana


Alignment Length:295 Identity:55/295 - (18%)
Similarity:113/295 - (38%) Gaps:88/295 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 VFFCLDTACVM----IFTAEYLLRLFAAPDRCKFVRSVMSIIDVVAIMPYYIGLGITD---NDDV 285
            ::||:.|.|.:    |.....:.:||          |:|.::         :|.|..|   :..|
plant   187 LYFCIVTMCTIGYGDITPNSVVTKLF----------SIMFVL---------VGFGFIDILLSGMV 232

  Fly   286 SGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLK----------SCASELGFLVFSLAMAIIIFAT 340
            |   ..|.:...:.:....|..:..:...|.:.          ..|..||.:|..:|:.:    .
plant   233 S---YVLDLQESYMLDSAKRRDEPEKRRSYIIDVKKGRMRIRLKVALALGVVVLCIAVGV----G 290

  Fly   341 VMFYAEKNVNGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVI 405
            :|.:.|: :...:      :|:.:::::||:||||...:|:.|::...:..|...|.:|.     
plant   291 IMHFIEE-IGWLD------SFYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLVSTLAVAR----- 343

  Fly   406 VSNFSRIYHQNQRADKRKAQRKARLARIRIAKASSGAAFVSKKKAAEARWAAQESGIELDDN--- 467
                :.:|....|.|||..:|                   :||...|....:|....::|:|   
plant   344 ----AFLYLAEARVDKRNRER-------------------AKKVLCETMSVSQFFAADIDNNGCV 385

  Fly   468 -YRDEDIFELQHHHLLRCLEKTTDREFVELEIPFN 501
             ..:..|::|:.      :||.||::.:.:...|:
plant   386 SKAEYVIYKLKE------MEKITDKDILPISKQFD 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727
Ion_trans 188..415 CDD:459842 37/203 (18%)
DUF3399 471..535 CDD:463381 7/31 (23%)
KCO6NP_193550.1 Ion_trans_2 156..237 CDD:462301 14/71 (20%)
Ion_trans_2 280..351 CDD:462301 17/90 (19%)
Blue background indicates that the domain is not in the aligned region.

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