DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and Kcnv1

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_080476.2 Gene:Kcnv1 / 67498 MGIID:1914748 Length:503 Species:Mus musculus


Alignment Length:427 Identity:148/427 - (34%)
Similarity:229/427 - (53%) Gaps:62/427 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 INVSGRRFETWRNTLEKYPDTLLGS------------------NEREFFYDED--CKEYFFDRDP 89
            :||.|.||...:..|..:|.|.||.                  :..|...|.:  ..||||||..
Mouse    46 VNVGGSRFVLSQQALSCFPHTRLGKLAVVVASYRRLGALAAAPSPLELCDDANPVDNEYFFDRSS 110

  Fly    90 DIFRHILNYYRTGKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRKRENAERL-----M 149
            ..||::|:|||||:||..:..|..|:.:|:.::||....|..||.:.| .|::|.:|.|     .
Mouse   111 QAFRYVLHYYRTGRLHVMEQLCALSFLQEIQYWGIDELSIDSCCRDRY-FRRKELSETLDFKKDT 174

  Fly   150 DDKLSEN-GDQNLQQ--LTNMRQKMWRAFENPHTSTSALVFYYVTGFFIAVSVMANVVETVPCGH 211
            ||:.|:: .:|:..:  ...:|||:|...|.|.:||:|.:|..::..|:|||:: |:        
Mouse   175 DDQESQHESEQDFSKGPCPTVRQKLWDILEKPGSSTAARIFGVISIIFVAVSIV-NM-------- 230

  Fly   212 RPGRAGTLPCGERYKI---VFFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSVMSIIDVVAIMPY 273
                  .|...|...:   :...|:..|:..||.|::||.....|||.|:|.|.:|||::||:|:
Mouse   231 ------ALMSAELSWLNLQLLEILEYVCISWFTGEFVLRFLCVKDRCHFLRKVPNIIDLLAILPF 289

  Fly   274 YIGLGITDNDDVSGAFVT------------LRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGF 326
            ||.|.:   :.:||:..|            ||:.|..|:.|..|||.|||.||.|:..|..|:|.
Mouse   290 YITLLV---ESLSGSHTTQELENVGRLVQVLRLLRALRMLKLGRHSTGLRSLGMTITQCYEEVGL 351

  Fly   327 LVFSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCS 391
            |:..|::.|.||:|:.::||:::..|.|||:|.|:|:...:|||:||||:.|:|..||||..:|.
Mouse   352 LLLFLSVGISIFSTIEYFAEQSIPDTTFTSVPCAWWWATTSMTTVGYGDIRPDTTTGKIVAFMCI 416

  Fly   392 LSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQRKA 428
            |||:||:|||:.:|...||..|...:..:....||:|
Mouse   417 LSGILVLALPIAIINDRFSACYFTLKLKEAAVRQREA 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 38/118 (32%)
Ion_trans 188..415 CDD:459842 90/241 (37%)
DUF3399 471..535 CDD:463381
Kcnv1NP_080476.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
BTB_POZ 44..163 CDD:453885 38/117 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..192 4/20 (20%)
Ion_trans 212..438 CDD:459842 91/243 (37%)
Selectivity filter. /evidence=ECO:0000250 395..400 3/4 (75%)
Blue background indicates that the domain is not in the aligned region.

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