DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and kcng3

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:XP_694001.2 Gene:kcng3 / 565643 ZFINID:ZDB-GENE-111111-9 Length:422 Species:Danio rerio


Alignment Length:404 Identity:126/404 - (31%)
Similarity:219/404 - (54%) Gaps:40/404 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LINVSGRRFETWRNTLEKYPDTLLG-----SNEREFF-----YDEDCKEYFFDRDPDIFRHILNY 98
            ::||.|.::...|..::.:|...:.     |:|:|..     ||.:..|:||||..:.|..|:.|
Zfish     9 ILNVGGTKYAFTREVIKDFPLRRVSRLHSCSSEKEVLEVCDDYDRERNEFFFDRHSEAFVFIMLY 73

  Fly    99 YRTGKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRKRENAERLMDDKL-----SENGD 158
            .|:|||.:....|..|:..|:.::|:....:..||.....||..:......:|.:     |...:
Zfish    74 VRSGKLRFVPQMCELSFYNEMIYWGLESSHLEFCCQRRLEDRMSDTYTYFSEDDMKAEVESRGEE 138

  Fly   159 QNLQQLTNMR------QKMWRAFENPHTSTSALVFYYVTGFFIAVSVMANVVETVPCGHRPGRAG 217
            :.:.:....|      ::|.|.||.|.:|.:|.:...|:..|:.:|::.....|:| .....:..
Zfish   139 EQVSRFAPDRGSARWLERMRRTFEEPASSIAAQILASVSVVFVIMSMVILCASTLP-DWDTAKNN 202

  Fly   218 TLPCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSVMSIIDVVAIMPYYIGLGIT-- 280
            |:   |.::|:    :..|:..||||.::|...:.|:|:|||..::|||::||.|||:.:.:|  
Zfish   203 TV---EEHRII----EAVCIGWFTAECIVRFIVSRDKCEFVRRPLNIIDLLAITPYYVSVAMTAL 260

  Fly   281 --DNDDVSGAFVTLRVFRVFRIF---KFSRHSQGLRILGYTLKSCASELGFLVFSLAMAIIIFAT 340
              :|..:..|.|||||.|:.|||   |.:||..||:.||.||:.|..|:..|:..:.:|:.||:.
Zfish   261 TGENPQLQRAGVTLRVLRMMRIFWLIKLARHFLGLQTLGLTLRRCYREMVMLLVFVCVAMAIFSA 325

  Fly   341 VMFYAEKNV----NGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALP 401
            :....|..:    :..::.||||:.|:.|::|||:|||||.|.||.|:::||||.:||::::|||
Zfish   326 LAQLLEHGLDLETSNEDYASIPASCWWVIISMTTVGYGDMYPITIPGRVLGGVCVVSGIVLLALP 390

  Fly   402 VPVIVSNFSRIYHQ 415
            :..|..:|.:.||:
Zfish   391 ITFIYHSFVQCYHE 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 30/109 (28%)
Ion_trans 188..415 CDD:459842 85/237 (36%)
DUF3399 471..535 CDD:463381
kcng3XP_694001.2 BTB_POZ_KCNG3 8..118 CDD:349729 30/108 (28%)
Ion_trans 170..406 CDD:459842 87/243 (36%)
Blue background indicates that the domain is not in the aligned region.

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