DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and Kcnq5

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_001153611.1 Gene:Kcnq5 / 226922 MGIID:1924937 Length:952 Species:Mus musculus


Alignment Length:339 Identity:81/339 - (23%)
Similarity:143/339 - (42%) Gaps:65/339 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 LMDDKLSENGDQNLQQLTNMRQ---KMWRAFENP-------HTSTSALVFYYVTGFFIAVSVMAN 202
            |:...||....|:.::....|:   .::...|.|       |    |.||..|.|..|     .:
Mouse    90 LLGKPLSYTSSQSCRRNVKYRRVQNYLYNVLERPRGWAFVYH----AFVFLLVFGCLI-----LS 145

  Fly   203 VVETVPCGHRPGRAGTLPCGERYKIVFFC---LDTACVMIFTAEYLLRLFAA---------PDRC 255
            |..|:|              |..|:...|   |:...:::|..|:::|:::|         ..|.
Mouse   146 VFSTIP--------------EHTKLASSCLLILEFVMIVVFGLEFIIRIWSAGCCCRYRGWQGRL 196

  Fly   256 KFVRSVMSIIDVVAIMP--YYIGLGITDNDDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLK 318
            :|.|....:||.:.::.  ..:......|...:.|..:||..::.|:.:..|.....::||..:.
Mouse   197 RFARKPFCVIDTIVLIASIAVVSAKTQGNIFATSALRSLRFLQILRMVRMDRRGGTWKLLGSVVY 261

  Fly   319 SCASEL------GFLVFSLAMAIIIFATVMFY-AEKNVNGTNFTSIPAAFWYTIVTMTTLGYGDM 376
            :.:.||      ||||       :||::.:.| .||:.| ..|::...|.|:..:|:||:||||.
Mouse   262 AHSKELITAWYIGFLV-------LIFSSFLVYLVEKDAN-KEFSTYADALWWGTITLTTIGYGDK 318

  Fly   377 VPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQRKARLARIRIAKASSG 441
            .|.|..|:::....:|.|:...|||..::.|.|: :..|.|...|...:|:...|.:......|.
Mouse   319 TPLTWLGRLLSAGFALLGISFFALPAGILGSGFA-LKVQEQHRQKHFEKRRNPAANLIQCVWRSY 382

  Fly   442 AAFVSKKKAAEARW 455
            ||  .:|..:.|.|
Mouse   383 AA--DEKSVSIATW 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727
Ion_trans 188..415 CDD:459842 59/247 (24%)
DUF3399 471..535 CDD:463381
Kcnq5NP_001153611.1 Ion_trans 127..359 CDD:459842 64/263 (24%)
Interaction with CALM. /evidence=ECO:0000250|UniProtKB:Q9NR82 371..379 1/7 (14%)
KCNQ_channel 467..654 CDD:460954
Interaction with CALM. /evidence=ECO:0000250|UniProtKB:Q9NR82 541..548
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 597..617
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 897..952
Blue background indicates that the domain is not in the aligned region.

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