DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and rpl-37.2

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_497727.1 Gene:rpl-37.2 / 175460 WormBaseID:WBGene00004451 Length:91 Species:Caenorhabditis elegans


Alignment Length:43 Identity:12/43 - (27%)
Similarity:14/43 - (32%) Gaps:10/43 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 GKLHYPKH----ECLTSYDEELAFFGIMPDVIGDCCYEDYRDR 140
            ||.|...|    .|..|      .|.|.......|.|:|.:.|
 Worm     9 GKKHVKSHTLCKRCGKS------SFHIQKKRCASCGYQDAKKR 45

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 12/43 (28%)
Ion_trans 188..415 CDD:459842
DUF3399 471..535 CDD:463381
rpl-37.2NP_497727.1 PTZ00073 1..90 CDD:240257 12/43 (28%)
Blue background indicates that the domain is not in the aligned region.

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