DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shal and kcns3

DIOPT Version :10

Sequence 1:NP_001097646.1 Gene:Shal / 40129 FlyBaseID:FBgn0005564 Length:571 Species:Drosophila melanogaster
Sequence 2:XP_031758930.1 Gene:kcns3 / 100497261 XenbaseID:XB-GENE-952059 Length:490 Species:Xenopus tropicalis


Alignment Length:421 Identity:149/421 - (35%)
Similarity:237/421 - (56%) Gaps:43/421 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 RRKTDDEKLLINVSGRRFETWRNTLEKYPDTLLGS-----NEREFF-----YDEDCKEYFFDRDP 89
            |.|.::|.:.:||.|.:....:.||.::|.|.||.     :|....     |:...|||:|||:|
 Frog     9 RTKNEEELVKLNVGGFKQSVDQKTLLRFPHTRLGKLLNCRSEEAILELCDDYNVADKEYYFDRNP 73

  Fly    90 DIFRHILNYYRTGKLHYPKHECLTSYDEELAFFGIMPDVIGDCCYEDYRDRKRENAERLMDDKL- 153
            .:||:|||:|.|||||..:..|:.|:.:|:.::||....|..||...|:::|...||:..|.|. 
 Frog    74 SLFRYILNFYYTGKLHVMEELCVFSFSQEIEYWGINELFIDSCCSNKYQEKKEIIAEKDWDQKSD 138

  Fly   154 -----SENGDQ-----------NLQQLTNMRQKMWRAFENPHTSTSALVFYYVTGFFIAVSVMAN 202
                 |.:.||           :..:..::|:|:|...|||..|.||.:|...:...:..|::|.
 Frog   139 IISLGSSSSDQSSVFERELEMFDTLKFGDIRRKIWIRLENPAYSLSAKLFAIASLSVVLTSIVAM 203

  Fly   203 VVETVPCGHRPGRAGTLPCGER--YKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSVMSII 265
            .:.::|      ....|...:|  ...|...::..|::.||:|.::||..||.:.||.::.|:||
 Frog   204 CIHSMP------EFKKLDANDRELEDPVLAVVEIVCIIWFTSELVIRLIVAPSQKKFWKNPMNII 262

  Fly   266 DVVAIMPYYIGLGITDNDDVS------GAFV-TLRVFRVFRIFKFSRHSQGLRILGYTLKSCASE 323
            |.|:|:|:|..|.:..||:.:      |..| .||:.|:|||.|.:|||.|||.||.|||....|
 Frog   263 DFVSIIPFYATLVVDVNDEENEGIENMGKVVQILRLMRIFRILKLARHSVGLRSLGATLKHSYHE 327

  Fly   324 LGFLVFSLAMAIIIFATVMFYAEKNVNGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGG 388
            :|.|:..||:.|.||:.:::|.||:.:.:...|||..:|:..::|||:||||..|.|:.||:||.
 Frog   328 VGLLLLFLAVGISIFSVLVYYVEKDEDQSGLHSIPMCWWWATISMTTVGYGDTHPVTLFGKLVGT 392

  Fly   389 VCSLSGVLVIALPVPVIVSNFSRIYHQNQRA 419
            ||.:.|:||:|||:.:|.:.||: |:|.|:|
 Frog   393 VCIICGILVVALPITIIFNKFSK-YYQKQKA 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShalNP_001097646.1 BTB_POZ_Shal-like 6..144 CDD:349727 42/118 (36%)
Ion_trans 188..415 CDD:459842 87/235 (37%)
DUF3399 471..535 CDD:463381
kcns3XP_031758930.1 BTB_POZ_KCNS3 15..122 CDD:349735 38/106 (36%)
Ion_trans 185..421 CDD:459842 90/242 (37%)
Blue background indicates that the domain is not in the aligned region.

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