DRSC/TRiP Functional Genomics Resources

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Protein Alignment rept and RIN1

DIOPT Version :10

Sequence 1:NP_524156.1 Gene:rept / 40092 FlyBaseID:FBgn0040075 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_197625.1 Gene:RIN1 / 832293 AraportID:AT5G22330 Length:458 Species:Arabidopsis thaliana


Alignment Length:459 Identity:202/459 - (44%)
Similarity:297/459 - (64%) Gaps:19/459 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EKI---EVRDVTRIERIGAHSHIRGLGLDDVLEARLVSQGMVGQKDARRAAGVVVQMVREGKIAG 66
            ||:   |::...:.:||..|:||:||||:.......::.|.|||.:||.|||:||.|:::.|:||
plant     2 EKVKIEEIQSTAKKQRIATHTHIKGLGLEPTGIPIKLAAGFVGQLEAREAAGLVVDMIKQKKMAG 66

  Fly    67 RCILLAGEPSTGKTAIAVGMAQALGTETPFTSMSGSEIYSLEMSKTEALSQALRKSIGVRIKEET 131
            :.:||||.|.|||||:|:|::|.||::.||..|.|||:||.|:.|||.|.:..|::||:||||..
plant    67 KALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKETK 131

  Fly   132 EIIEGEVVEIQIERPASGTGQKVGK------VTLKTTEMETNYDLGNKIIECFMKEKIQAGDVIT 190
            |:.||||.|:..|...|.|| ..||      :||||.:...:..|...|.:..:|||:..||||.
plant   132 EVYEGEVTELSPEETESLTG-GYGKSISHVVITLKTVKGTKHLKLDPTIYDALIKEKVAVGDVIY 195

  Fly   191 IDKASGKVNKLGRSFTRARDYDATGAQTRFVQCPEGELQKRKEVVHTVTLHEIDVINSRTHG--- 252
            |:..||.|.::|||...|.::|....:  :|..|:||:.|:||:|..|||.::|..|:|..|   
plant   196 IEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQDVTLQDLDAANARPQGGQD 258

  Fly   253 FLAL----FSGDTGEIKQEVRDQINNKVLEWREEGKAEINPGVLFIDEVHMLDIECFSFLNRALE 313
            .|:|    ......||..::|.:||..|..:.:||.||:.|||||||||||||:||||:||||||
plant   259 ILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPGVLFIDEVHMLDMECFSYLNRALE 323

  Fly   314 SDMAPVVVMATNRGITRIRGTNYRSPHGIPIDLLDRMIIIRTVPYSEKEVKEILKIRCEEEDCIM 378
            |.::|:|:.|||||:..:|||:..||||:|||||||::||||..|...|:.:|:.||.:.|:..:
plant   324 SSLSPIVIFATNRGVCNVRGTDMPSPHGVPIDLLDRLVIIRTQIYDPSEMIQIIAIRAQVEELTV 388

  Fly   379 HPDALTILTRIATDTSLRYAIQLITTANLVCRRRKATEVNTEDVKKVYSLFLDENRSSKILKEYQ 443
            ..:.|.:|..|...||||:|:||::.|::|.:......:...|:::|.||:||...|:|:|.|.|
plant   389 DEECLVLLGEIGQRTSLRHAVQLLSPASIVAKMNGRDNICKADIEEVTSLYLDAKSSAKLLHEQQ 453

  Fly   444 DDYM 447
            :.|:
plant   454 EKYI 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
reptNP_524156.1 TIP49 17..361 CDD:399217 170/356 (48%)
TIP49_C 366..431 CDD:436097 20/64 (31%)
RIN1NP_197625.1 TIP49 17..370 CDD:399217 170/355 (48%)
TIP49_C 376..441 CDD:436097 20/64 (31%)

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