DRSC/TRiP Functional Genomics Resources

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Protein Alignment rept and AT3G49830

DIOPT Version :9

Sequence 1:NP_001262040.1 Gene:rept / 40092 FlyBaseID:FBgn0040075 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_190552.1 Gene:AT3G49830 / 824145 AraportID:AT3G49830 Length:473 Species:Arabidopsis thaliana


Alignment Length:469 Identity:304/469 - (64%)
Similarity:382/469 - (81%) Gaps:11/469 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAETEKIEVRDVTRIERIGAHSHIRGLGLDDVLEARLVSQGMVGQKDARRAAGVVVQMVREGKIA 65
            |||....|.||:||||||||||||||||||.|||.|.||:|||||..||:||||.::::|:|||:
plant     1 MAELRLSETRDLTRIERIGAHSHIRGLGLDSVLEPRAVSEGMVGQIKARKAAGVTLELIRDGKIS 65

  Fly    66 GRCILLAGEPSTGKTAIAVGMAQALGTETPFTSMSGSEIYSLEMSKTEALSQALRKSIGVRIKEE 130
            ||.||:||:|.|||.|||:|:|::||.|||||.::||||:||||||||||:||.||:||||||||
plant    66 GRAILIAGQPGTGKIAIAMGIAKSLGQETPFTMIAGSEIFSLEMSKTEALTQAFRKAIGVRIKEE 130

  Fly   131 TEIIEGEVVEIQIERPAS--GTGQKVGKVTLKTTEMETNYDLGNKIIECFMKEKIQAGDVITIDK 193
            |::||||||.|.|:||||  |:.:|.||:|:|||:||:|:|||.|:||...|||:|:||||.:|:
plant   131 TDVIEGEVVTISIDRPASSGGSVKKTGKITMKTTDMESNFDLGWKLIEPLDKEKVQSGDVIVLDR 195

  Fly   194 ASGKVNKLGRSFTRARDYDATGAQTRFVQCPEGELQKRKEVVHTVTLHEIDVINSRTHGFLALFS 258
            ..||:.||||||||:||:|..|::|:|||||||||:|||||:|:|||||||||||||.|:||||:
plant   196 FCGKITKLGRSFTRSRDFDVMGSKTKFVQCPEGELEKRKEVLHSVTLHEIDVINSRTQGYLALFT 260

  Fly   259 GDTGEIKQEVRDQINNKVLEWREEGKAEINPGVLFIDEVHMLDIECFSFLNRALESDMAPVVVMA 323
            ||||||:.|.|:|.:.||.||||||||||.|||||||||||||||||||||||||:||:|::|:|
plant   261 GDTGEIRSETREQSDTKVAEWREEGKAEIVPGVLFIDEVHMLDIECFSFLNRALENDMSPILVVA 325

  Fly   324 TNRGITRIRGTNYRSPHGIPIDLLDRMIIIRTVPYSEKEVKEILKIRCEEEDCIMHPDALTILTR 388
            ||||:|.|||||..|.||||||.|||::||.|.||::.|::.||:|||:|||..|:.:|..:||.
plant   326 TNRGMTTIRGTNQISAHGIPIDFLDRLLIITTQPYTQDEIRNILEIRCQEEDVEMNEEAKQLLTL 390

  Fly   389 IATDTSLRYAIQLITTANLVCRRRKATEVNTEDVKKVYSLFLDENRSSKILKEYQDDYMFS---- 449
            |..:|||||||.||..|.|.|.:||...|..:|:::||.||||..||.:.|.|::.:|:||    
plant   391 IGCNTSLRYAIHLINAAALACLKRKGKVVEIQDIERVYRLFLDTKRSMQYLVEHESEYLFSVPIK 455

  Fly   450 ---EIT--EEVERD 458
               |.|  ||.|.:
plant   456 NTQEATAGEETEHE 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
reptNP_001262040.1 TIP49 17..408 CDD:283678 270/392 (69%)
P-loop_NTPase 69..>113 CDD:304359 30/43 (70%)
AAA <267..358 CDD:99707 68/90 (76%)
AT3G49830NP_190552.1 TIP49 17..409 CDD:283678 270/391 (69%)
P-loop_NTPase 69..>122 CDD:304359 37/52 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 534 1.000 Domainoid score I59
eggNOG 1 0.900 - - E1_COG1224
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4856
Inparanoid 1 1.050 648 1.000 Inparanoid score I174
OMA 1 1.010 - - QHG53744
OrthoDB 1 1.010 - - D752343at2759
OrthoFinder 1 1.000 - - FOG0004276
OrthoInspector 1 1.000 - - otm3192
orthoMCL 1 0.900 - - OOG6_101635
Panther 1 1.100 - - O PTHR11093
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3010
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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