DRSC/TRiP Functional Genomics Resources

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Protein Alignment rept and AT3G49830

DIOPT Version :10

Sequence 1:NP_524156.1 Gene:rept / 40092 FlyBaseID:FBgn0040075 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_190552.1 Gene:AT3G49830 / 824145 AraportID:AT3G49830 Length:473 Species:Arabidopsis thaliana


Alignment Length:469 Identity:304/469 - (64%)
Similarity:382/469 - (81%) Gaps:11/469 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAETEKIEVRDVTRIERIGAHSHIRGLGLDDVLEARLVSQGMVGQKDARRAAGVVVQMVREGKIA 65
            |||....|.||:||||||||||||||||||.|||.|.||:|||||..||:||||.::::|:|||:
plant     1 MAELRLSETRDLTRIERIGAHSHIRGLGLDSVLEPRAVSEGMVGQIKARKAAGVTLELIRDGKIS 65

  Fly    66 GRCILLAGEPSTGKTAIAVGMAQALGTETPFTSMSGSEIYSLEMSKTEALSQALRKSIGVRIKEE 130
            ||.||:||:|.|||.|||:|:|::||.|||||.::||||:||||||||||:||.||:||||||||
plant    66 GRAILIAGQPGTGKIAIAMGIAKSLGQETPFTMIAGSEIFSLEMSKTEALTQAFRKAIGVRIKEE 130

  Fly   131 TEIIEGEVVEIQIERPAS--GTGQKVGKVTLKTTEMETNYDLGNKIIECFMKEKIQAGDVITIDK 193
            |::||||||.|.|:||||  |:.:|.||:|:|||:||:|:|||.|:||...|||:|:||||.:|:
plant   131 TDVIEGEVVTISIDRPASSGGSVKKTGKITMKTTDMESNFDLGWKLIEPLDKEKVQSGDVIVLDR 195

  Fly   194 ASGKVNKLGRSFTRARDYDATGAQTRFVQCPEGELQKRKEVVHTVTLHEIDVINSRTHGFLALFS 258
            ..||:.||||||||:||:|..|::|:|||||||||:|||||:|:|||||||||||||.|:||||:
plant   196 FCGKITKLGRSFTRSRDFDVMGSKTKFVQCPEGELEKRKEVLHSVTLHEIDVINSRTQGYLALFT 260

  Fly   259 GDTGEIKQEVRDQINNKVLEWREEGKAEINPGVLFIDEVHMLDIECFSFLNRALESDMAPVVVMA 323
            ||||||:.|.|:|.:.||.||||||||||.|||||||||||||||||||||||||:||:|::|:|
plant   261 GDTGEIRSETREQSDTKVAEWREEGKAEIVPGVLFIDEVHMLDIECFSFLNRALENDMSPILVVA 325

  Fly   324 TNRGITRIRGTNYRSPHGIPIDLLDRMIIIRTVPYSEKEVKEILKIRCEEEDCIMHPDALTILTR 388
            ||||:|.|||||..|.||||||.|||::||.|.||::.|::.||:|||:|||..|:.:|..:||.
plant   326 TNRGMTTIRGTNQISAHGIPIDFLDRLLIITTQPYTQDEIRNILEIRCQEEDVEMNEEAKQLLTL 390

  Fly   389 IATDTSLRYAIQLITTANLVCRRRKATEVNTEDVKKVYSLFLDENRSSKILKEYQDDYMFS---- 449
            |..:|||||||.||..|.|.|.:||...|..:|:::||.||||..||.:.|.|::.:|:||    
plant   391 IGCNTSLRYAIHLINAAALACLKRKGKVVEIQDIERVYRLFLDTKRSMQYLVEHESEYLFSVPIK 455

  Fly   450 ---EIT--EEVERD 458
               |.|  ||.|.:
plant   456 NTQEATAGEETEHE 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
reptNP_524156.1 TIP49 17..361 CDD:399217 246/345 (71%)
TIP49_C 366..431 CDD:436097 33/64 (52%)
AT3G49830NP_190552.1 TIP49 17..363 CDD:399217 246/345 (71%)
TIP49_C 368..433 CDD:436097 33/64 (52%)

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