DRSC/TRiP Functional Genomics Resources

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Protein Alignment rept and pont

DIOPT Version :10

Sequence 1:NP_524156.1 Gene:rept / 40092 FlyBaseID:FBgn0040075 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_652608.1 Gene:pont / 53439 FlyBaseID:FBgn0040078 Length:456 Species:Drosophila melanogaster


Alignment Length:490 Identity:91/490 - (18%)
Similarity:149/490 - (30%) Gaps:216/490 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NEFIYLRLSEENAKHLNSYSPDFEVTPFDEYYQPAEASNTIISLRF--TPYELHRILHGYDLNDL 81
            :|.:: ||:......::...||.          .:.|.:|:|.|..  |.:.:.           
  Fly    43 DEIVH-RLNNGRRSEIDEVKPDL----------VSGAGDTVIKLNVGGTSFRIR----------- 85

  Fly    82 SNDDEDDHDDVQSHTSHSSTDSDSVF--VSHSETARKI-SFLIEELLDTERNYINTLEKGIATYI 143
                      :.|..:.|:.:..|.|  ::|.:..:.. :||:.:    |..|   ||:. |...
  Fly    86 ----------ISSIFARSADEKLSAFAQLNHEQRLQACDAFLMPQ----EEYY---LERS-AVLF 132

  Fly   144 DAVFTDQTPPELCGKKYHLFGNLQYIYRFHRNAFLPRLLTAGNDV-------EL----IADAFVH 197
            |::|           ||::.|.|      ||..          ||       ||    |.|.   
  Fly   133 DSIF-----------KYYISGQL------HRPL----------DVCPTEFATELAYWKINDG--- 167

  Fly   198 FLDNDSFYGY----VLYSMYHPKSQRLCEQHIEFFRQ--HQQQHGD----------------KLG 240
            .:.|..:.||    .|..:..||.::: |.|....|.  ||...||                .:.
  Fly   168 LMSNCCWRGYNMSPSLEELVAPKEKKI-ELHDRSMRSRIHQFCEGDGSLFSTLFTFGSITFVLIS 231

  Fly   241 VKSLILQPIQ--RLPRYQLLLTSLFKQLVKKPGAISRNTQ------------------------- 278
            |..|:|..|.  ::|.|            ||.|...|.:.                         
  Fly   232 VIGLVLGSIHEFQVPIY------------KKGGKSERISNWSIADQNGTDSSVENENIIWEPHPI 284

  Fly   279 ---LHKVC-------------VAEKRLQTLIGIMN--ESVTVNDILQCEKAEDDEVELG---FGV 322
               :..||             |...|.|.|:||||  :.:.:....         :|||   ||:
  Fly   285 FGYVETVCIIWFTVEFIVRLAVTPNRFQFLVGIMNIVDMIAIIPFY---------LELGLALFGI 340

  Fly   323 PKPAI-----------VLRNQNHDNQVLFLYPKDNEHVDHNKPINILHQGKFRSVFPVFINDLRL 376
            ...::           |||       ||             :.:.||..|::.|....|...|:.
  Fly   341 DVASLSDIKGA
LLVVRVLR-------VL-------------RVVRILKLGRYSSGMRTFALTLKS 385

  Fly   377 KRQYQGRL-------FVFERCVIYTEQLDLKSLTY 404
            ..:..|.:       .||...::|..:.|.|...:
  Fly   386 SARQLGMMGMVLSTGVVFFSTLLYFVEKDEKDTPF 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
reptNP_524156.1 TIP49 17..361 CDD:399217 81/438 (18%)
TIP49_C 366..431 CDD:436097 8/46 (17%)
pontNP_652608.1 TIP49 14..351 CDD:399217 74/399 (19%)
TIP49_C 374..439 CDD:436097 9/47 (19%)

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