DRSC/TRiP Functional Genomics Resources

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Protein Alignment rept and ruvbl2

DIOPT Version :10

Sequence 1:NP_524156.1 Gene:rept / 40092 FlyBaseID:FBgn0040075 Length:481 Species:Drosophila melanogaster
Sequence 2:XP_012821814.1 Gene:ruvbl2 / 448144 XenbaseID:XB-GENE-483344 Length:462 Species:Xenopus tropicalis


Alignment Length:143 Identity:29/143 - (20%)
Similarity:59/143 - (41%) Gaps:12/143 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   436 EVKVNIQSPGKTHLPDVMMAIKTIIDRRDQRESFAFDGAAGEALAMLRDTF---------SRRNS 491
            :::|.|....|..:|.|...:..::::|......| ...|...:::...|.         |..::
 Frog   254 DLRVLIPPGSKNTMPSVSEDVDLLLNQRINNSQSA-QSLATPVVSVATPTLPGQGMGGYPSAIST 317

  Fly   492 SFRSSFSSTTSDSSFLSVFSSPAAAAAAEEDSTAAGSAHR-AGSVLSECGSIETMLHFQQHFERA 555
            ::.:.:|.:::|.|.||.|::.:|..............|. ..|.||:.|:. |..|..|....:
 Frog   318 TYGTEYSLSSADLSSLSGFNTASALHLGSVTGWQQQHLHNMPPSALSQLGAC-TSTHLSQSSNLS 381

  Fly   556 LHECTNLYIRTLP 568
            |....:|.|::.|
 Frog   382 LPSTQSLNIKSEP 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
reptNP_524156.1 TIP49 17..361 CDD:399217
TIP49_C 366..431 CDD:436097
ruvbl2XP_012821814.1 TIP49 20..364 CDD:399217 19/110 (17%)
TIP49_C 369..434 CDD:436097 7/27 (26%)
Blue background indicates that the domain is not in the aligned region.

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