DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rept and rept

DIOPT Version :10

Sequence 1:NP_524156.1 Gene:rept / 40092 FlyBaseID:FBgn0040075 Length:481 Species:Drosophila melanogaster
Sequence 2:XP_318830.2 Gene:rept / 1279153 VectorBaseID:AGAMI1_003852 Length:469 Species:Anopheles gambiae


Alignment Length:470 Identity:405/470 - (86%)
Similarity:441/470 - (93%) Gaps:5/470 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAETEKIEVRDVTRIERIGAHSHIRGLGLDDVLEARLVSQGMVGQKDARRAAGVVVQMVREGKIA 65
            |.:.||||:|||||||||||||||||||||||||||.|||||||||:||||||:|||||||||||
Mosquito     1 MTDLEKIEIRDVTRIERIGAHSHIRGLGLDDVLEARTVSQGMVGQKEARRAAGIVVQMVREGKIA 65

  Fly    66 GRCILLAGEPSTGKTAIAVGMAQALGTETPFTSMSGSEIYSLEMSKTEALSQALRKSIGVRIKEE 130
            ||||||||||||||||||||||||||.|||||||||||||||||:||||||||||||||:|||||
Mosquito    66 GRCILLAGEPSTGKTAIAVGMAQALGNETPFTSMSGSEIYSLEMNKTEALSQALRKSIGLRIKEE 130

  Fly   131 TEIIEGEVVEIQIERPASGTGQKVGKVTLKTTEMETNYDLGNKIIECFMKEKIQAGDVITIDKAS 195
            |||||||||||||:|||:||||||||||:|||:|||||||||||||||:||||||||:|||||||
Mosquito   131 TEIIEGEVVEIQIDRPATGTGQKVGKVTMKTTDMETNYDLGNKIIECFIKEKIQAGDIITIDKAS 195

  Fly   196 GKVNKLGRSFTRARDYDATGAQTRFVQCPEGELQKRKEVVHTVTLHEIDVINSRTHGFLALFSGD 260
            |||:||||||||||||||||:||||||||||||||||||||||:|||||||||||||||||||||
Mosquito   196 GKVSKLGRSFTRARDYDATGSQTRFVQCPEGELQKRKEVVHTVSLHEIDVINSRTHGFLALFSGD 260

  Fly   261 TGEIKQEVRDQINNKVLEWREEGKAEINPGVLFIDEVHMLDIECFSFLNRALESDMAPVVVMATN 325
            |||||||||||||:||:|||||||||||||||||||.||||||||||||||||||||||||||||
Mosquito   261 TGEIKQEVRDQINSKVIEWREEGKAEINPGVLFIDECHMLDIECFSFLNRALESDMAPVVVMATN 325

  Fly   326 RGITRIRGTNYRSPHGIPIDLLDRMIIIRTVPYSEKEVKEILKIRCEEEDCIMHPDALTILTRIA 390
            ||||:||||:|||||||||||||||||||||||:|||:|||||||||||||.::.|||.:|.|||
Mosquito   326 RGITKIRGTHYRSPHGIPIDLLDRMIIIRTVPYTEKEIKEILKIRCEEEDCQINNDALMVLGRIA 390

  Fly   391 TDTSLRYAIQLITTANLVCRRRKATEVNTEDVKKVYSLFLDENRSSKILKEYQDDYMFSEITEEV 455
            |:||||||||.||||:||.:||||.|:..||::|||||||||.|||||||||||:|:|.:     
Mosquito   391 TETSLRYAIQSITTASLVSKRRKAAEIMVEDIRKVYSLFLDEKRSSKILKEYQDEYLFYD----- 450

  Fly   456 ERDPAAGGGAKRRVE 470
            :..|.|.|...:.:|
Mosquito   451 DSLPKAEGQQAQAME 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
reptNP_524156.1 TIP49 17..361 CDD:399217 322/343 (94%)
TIP49_C 366..431 CDD:436097 46/64 (72%)
reptXP_318830.2 TIP49 17..361 CDD:399217 322/343 (94%)
TIP49_C 366..431 CDD:436097 46/64 (72%)

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