DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gem2 and AT2G42510

DIOPT Version :10

Sequence 1:NP_649092.1 Gene:Gem2 / 40087 FlyBaseID:FBgn0036850 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001154570.1 Gene:AT2G42510 / 818851 AraportID:AT2G42510 Length:653 Species:Arabidopsis thaliana


Alignment Length:208 Identity:48/208 - (23%)
Similarity:67/208 - (32%) Gaps:67/208 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EPDSSFDPQKPPESGEEYLMHMFYERKRCPAV-VTKRS-SKIRNNTGNTTLEMLDNPELP----- 76
            |||  || ..|||.|.|||..:.:|.||.|.| |.|.| ||.|....:..:     |::|     
plant   458 EPD--FD-SGPPEDGIEYLRRVRWEAKRIPNVKVAKVSGSKYREKEQSVYM-----PQIPRAPAT 514

  Fly    77 --------PFKCLLPTPEWRDEQVKSFQAARSQVLVLRKELANNNYDQSGEPPLTSDQEKWKEFC 133
                    .|:.|.     ....:..||.|...|.:|..:...|....:|.....:|....||  
plant   515 GEGMGGLVAFRLLT-----HSSGIPFFQLAYLSVFLLTDKDTRNGLSDTGIKAEKADMFGEKE-- 572

  Fly   134 RNQQPLLSTLLHLTQNDLELLLEMLSKWLQDPNTTVDLLHDVWLARWLYATLVCLHLPLEPHVFS 198
                      ..|..:|                           .:|:.|....:..|.:....:
plant   573 ----------SGLESSD---------------------------CKWVVALCASVDTPPDADTSA 600

  Fly   199 TLRYIARTCIHLR 211
            .||.:.|.|..||
plant   601 CLRALVRKCASLR 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gem2NP_649092.1 SIP1 21..238 CDD:461493 46/206 (22%)
AT2G42510NP_001154570.1 SIP1 458..630 CDD:461493 48/208 (23%)

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