DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Gem2 and AT2G42510

Sequence 1:NP_001262034.1 Gene:Gem2 FlyBaseID:FBgn0036850 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001154570.1 Gene:AT2G42510 AraportID:AT2G42510 Length:653 Species:Arabidopsis thaliana

Alignment Length:208 Identity:48/209 (23%)
Similarity:67/209 (32%) Gaps:67/209 (32%)


  Fly    19 EPDSSFDPQKPPESGEEYLMHMFYERKRCPAV-VTKRS-SKIRNNTGNTTLEMLDNPELP----- 76
            |||  || ..|||.|.|||..:.:|.||.|.| |.|.| ||.|....:..:     |::|     
plant   458 EPD--FD-SGPPEDGIEYLRRVRWEAKRIPNVKVAKVSGSKYREKEQSVYM-----PQIPRAPAT 514

  Fly    77 --------PFKCLLPTPEWRDEQVKSFQAARSQVLVLRKELANNNYDQSGEPPLTSDQEKWKEFC 133
                    .|:.|.     ....:..||.|...|.:|..:...|....:|.....:|....||  
plant   515 GEGMGGLVAFRLLT-----HSSGIPFFQLAYLSVFLLTDKDTRNGLSDTGIKAEKADMFGEKE-- 572

  Fly   134 RNQQPLLSTLLHLTQNDLELLLEMLSKWLQDPNTTVDLLHDVWLARWLYATLVCLHLPLEPHVFS 198
                      ..|..:|                           .:|:.|....:..|.:....:
plant   573 ----------SGLESSD---------------------------CKWVVALCASVDTPPDADTSA 600

  Fly   199 TLRYIARTCIHLR 211
            .||.:.|.|..||
plant   601 CLRALVRKCASLR 613

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Gem2NP_001262034.1 SIP1 18..239 CDD:282754 48/209 (23%)
AT2G42510NP_001154570.1 SIP1 454..614 CDD:282754 48/209 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1235594at2759
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR12794
Phylome 00.000 Not matched by this tool.
22.110

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