DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Gem2 and col-122

Sequence 1:NP_001262034.1 Gene:Gem2 FlyBaseID:FBgn0036850 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_501700.1 Gene:col-122 WormBaseID:WBGene00000696 Length:300 Species:Caenorhabditis elegans

Alignment Length:32 Identity:11/33 (33%)
Similarity:19/33 (58%) Gaps:10/33 (30%)


  Fly   186 VCLHLPLEPHVFSTLRYIARTCIHLRNQLKED 217
            ||:.|||   |:|   |::    :||:|:..:
 Worm    27 VCITLPL---VYS---YVS----NLRSQMHSE 48

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Gem2NP_001262034.1 SIP1 18..239 CDD:282754 11/33 (33%)
col-122NP_501700.1 Col_cuticle_N 11..60 CDD:198156 11/33 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 0 Normalized mean entropy S3221
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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