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Protein Alignment SmydA-2 and Smyd3

DIOPT Version :9

Sequence 1:	NP_649084.1	Gene:	SmydA-2 / 40075	FlyBaseID:	FBgn0036839	Length:	530	Species:	Drosophila melanogaster
Sequence 2:	NP_081464.1	Gene:	Smyd3 / 69726	MGIID:	1916976	Length:	428	Species:	Mus musculus

Alignment Length:	458	Identity:	106/458 - (23%)
Similarity:	173/458 - (37%)	Gaps:	150/458 - (32%)

- Green bases have known domain annotations that are detailed below.

  Fly    58 GRHLRATRDIKIGEQILKEAPLVLGPKVASAPLCLG-----CHRNLLAPGKPRGNYHKCSSCS-W 116
            |..|||...::.||.:.:..||       :..:|.|     |.|.||  ||.:  ..:||.|. .
Mouse    15 GNGLRAVAPLRPGELLFRSDPL-------AYTVCKGSRGVVCDRCLL--GKEK--LMRCSQCRIA 68

  Fly   117 PLCGKECEDSV--HHKAECQLMSGSNFQSKINYVPGEEERKESAYCVIMLLR-CMHLKDKDPDAF 178
            ..|..:|:...  .|:.||..:.    ..|..|.|..         |.:|.| .:.|.|:.|...
Mouse    69 KYCSAKCQKKAWPDHRRECSCLK----SCKPRYPPDS---------VRLLGRVIVKLMDEKPSES 120

  Fly   179 LKL---YNLEDHLKERLETPLYQVLRANLITF-------IKTVLGMKDWPEMDILRIAAILDTNT 233
            .||   |:||.:: .:|.....:.||...:||       |:....:.  |..|:....|.:..|:
Mouse   121 EKLYSFYDLESNI-SKLTEDKKEGLRQLAMTFQHFMREEIQDASQLP--PSFDLFEAFAKVICNS 182

  Fly   234 FEVRQPRERRKIRALYPGAAMISHDCVPNMRHRFDDDMNIVFLAKRKIAKGEILSISYTQPLRST 298
            |.:.....:.....|||..::::|.|.||....|:.. :::..|.|:|..||.|:|.|...|.::
Mouse   183 FTICNAEMQEVGVGLYPSMSLLNHSCDPNCSIVFNGP-HLLLRAVREIEAGEELTICYLDMLMTS 246

  Fly   299 IQRRVHLRQAKCFDCSCARCQDPEELGSFAGAQTCLKCKAGKIISLNPLLNSAPWKCQLCNFKRS 363
            .:||..||...||:|.|.|||..::
Mouse   247 EERRKQLRDQYCFECDCIRCQTQDK---------------------------------------- 271

  Fly   364 AKDVVTSDAELQQEL-ESLDKTTPVALEEFIYRHRADLHETNTHILQAKYALTQLYGSAPGFAME 427
            ..|::|.|.::.:|: |||.|     :||                |:|.:...|:
Mouse   272 DADMLTGDEQIWKEVQESLKK-----IEE----------------LKAHWKWEQV---------- 305

  Fly   428 ELSGESLNRKLQLCEELL-----KLADIFDGGWSIFRGNLL---ID-------MEEALVTQALRS 477
                      |.||:.::     :|.||     :|::..:|   :|       :||||. .|:|:
Mouse   306 ----------LALCQAIINSNSNRLPDI-----NIYQLKVLDCAMDACINLGMLEEALF-YAMRT 354

  Fly   478 KDP 480
            .:|
Mouse   355 MEP 357

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.