DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-2 and Smyd4-1

DIOPT Version :10

Sequence 1:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster


Alignment Length:537 Identity:111/537 - (20%)
Similarity:195/537 - (36%) Gaps:121/537 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ALCQAKASQLCAACRNVVYCSREHQKEHWKKGHRSECQCFEIATN-----------------EVL 57
            |.|..|..::.:...::.|..:...||.:::......|..|:..|                 |:|
  Fly   155 AFCAWKLKKIASLEEHLDYLGQLQLKESFEQQLEDLKQKLELLKNQPREQETQGKVVDKSLGEIL 219

  Fly    58 ------GRHLRATRDIKIGEQILKEAPLVLGPKVASAPLCLGCHRNLLAPGKPRGNYHKCSSCSW 116
                  ||::.|...|..|..|..|......| :....:|..|...|::...|      |.:|..
  Fly   220 TDPGPRGRYMVAKEAISKGNVIFSERASCFVP-LEQLLICQQCAATLMSAPIP------CPNCHQ 277

  Fly   117 PL--CGKECED--SVHHKAEC--------QLMSGSNFQSK--INYVPG-EEERKESAYCVIMLLR 166
            .:  |.::|.:  |..||.||        :|:..|:...:  :.|:|. ....:|......|...
  Fly   278 RVVYCSRKCREAHSAIHKFECAAYRKDILRLLGISHLALRLLLTYIPYIRPHLQEMTSAKGMWEE 342

  Fly   167 CMHLKDKDPDA-----FLKLYNLEDHLKERLETPL-YQVLRANLI------------TFIKTVLG 213
            .|:|..|..::     :|:...:...|.:.::..| |.:|.|||:            .|......
  Fly   343 IMNLSRKPEESENAPEYLRSLRMVSQLDQAIDEELNYHILCANLLQLYLKEHTDFYDQFHSLPAS 407

  Fly   214 MKDWP---EMDILRIAAILDTN---------------TFEVRQPRERRKIRAL------------ 248
            ::||.   ...|||.|..|..|               .|.:.||...:|.|.|            
  Fly   408 IEDWQLIISALILRFAGQLLANGHVGDALLGVGMEPKEFVMLQPELWQKPRHLKRGQLHNLSHSD 472

  Fly   249 ------YPGAAMISHDCVPNMRHRFDDDMNIVFLAKRKIAKGEILSISYTQPLRST--IQRRVHL 305
                  .|..::.:|.|.|::|.:| |..::|..|.:.|.:||.:...||...|::  :||...|
  Fly   473 PITAINLPYLSLCNHACEPSIRTKF-DGCSVVNYAAKDILEGEEIFNCYTMDYRNSLKLQRSHPL 536

  Fly   306 RQAKCFDCSCARC--QDPEELGSFAGAQTCLK--CKAGKIISLNPLLNSAPWKCQLCNFKRSAKD 366
            :....|:|:||:|  .||::.........|.|  |:...:.......|:..|..: ||.::....
  Fly   537 KAIYKFECTCAKCTRTDPDQNYLSFHRYRCEKPNCRQEFLPDAKVQQNNLRWWLR-CNAEKPITC 600

  Fly   367 VVTSDAELQ------QELESLDKTTPVALEEFIYRHRADL------HETNTHILQAKYALTQLYG 419
            .|..  |||      :.|..:..:...:..:.:::...||      |.:...|:..:......|.
  Fly   601 TVCH--ELQHFAWYNEFLGLIGSSADSSKRQALFKAFDDLDKWLVDHHSLKRIMAEELVTACFYE 663

  Fly   420 SAPGFAMEELSGESLNR 436
            ...|.:::|...|.|.|
  Fly   664 IDGGTSLDEFEYEDLAR 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312 6/35 (17%)
SET_SMYD <227..318 CDD:380997 30/125 (24%)
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802 10/35 (29%)
zf-MYND 258..298 CDD:460312 11/45 (24%)
SET <359..549 CDD:394802 45/190 (24%)

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