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Protein Alignment SmydA-2 and Smyd2

DIOPT Version :9

Sequence 1:	NP_649084.1	Gene:	SmydA-2 / 40075	FlyBaseID:	FBgn0036839	Length:	530	Species:	Drosophila melanogaster
Sequence 2:	NP_081072.1	Gene:	Smyd2 / 226830	MGIID:	1915889	Length:	433	Species:	Mus musculus

Alignment Length:	380	Identity:	86/380 - (22%)
Similarity:	144/380 - (37%)	Gaps:	78/380 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly    58 GRHLRATRDIKIGEQILKEAP-----LVLGPKVASAPLCLGCHRNLLAPGKPRGNYHKCSSCSWP 117
            ||.|||.|...:|: :|...|     |.:|.:......|......|          .||..|...
Mouse    18 GRGLRALRPFHVGD-LLFSCPAYACVLTVGERGHHCECCFARKEGL----------SKCGRCKQA 71

  Fly   118 L-CGKEC--EDSVHHKAECQLM--SGSNFQSKINYVPGEEERKESAYCVIMLLRCMHLKDKDPDA 177
            . |..||  ||...||.||..|  .|.|:.      |.|..|..:.   |:..:.:|.:....:.
Mouse    72 FYCDVECQKEDWPLHKLECSSMVVLGENWN------PSETVRLTAR---ILAKQKIHPERTPSEK 127

  Fly   178 FLKLYNLEDHLKERLETPLYQVLRANLIT---FIKTVLGMKDWPEMDILRIAAILDTNTFEVRQP 239
            .|.:...|.|| ::|:.....::::::..   |....|...|...:.:|  .|.::.|.|.:...
Mouse   128 LLAVREFESHL-DKLDNEKKDLIQSDIAALHQFYSKYLEFPDHSSLVVL--FAQVNCNGFTIEDE 189

  Fly   240 RERRKIRALYPGAAMISHDCVPNMRHRFDDDMNIVFLAKRKIAKGEILSISYTQPLRSTIQRRVH 304
            .......|::|..|:::|.|.||:...:...:..| .|.::|..|:.:..||...|..|..|...
Mouse   190 ELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEV-RAVQEIHPGDEVFTSYIDLLYPTEDRNDR 253

  Fly   305 LRQAKCFDCSCARC--QDPEELGSFAGAQTCLKCKAGKIISLNPLLNSAPWKCQLCNFKRSAKDV 367
            ||.:..|.|.|..|  :|.::          .|.:..|       |:|.|....:.:..|.|::|
Mouse   254 LRDSYFFTCECRECTTKDKDK----------AKVEVRK-------LSSPPQAEAIRDMVRYARNV 301

  Fly   368 V---------TSDAELQQELE-SLDKTTPVALEEFIYRHRADLHETNTHILQAKY 412
            :         .|.:||.:..| |.:|.:.|            ..::|.::|...|
Mouse   302 IEEFRRAKHYKSPSELLEICELSQEKMSSV------------FEDSNVYMLHMMY 344

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.