DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX6AL2 and COX13

DIOPT Version :10

Sequence 1:NP_649075.1 Gene:COX6AL2 / 40066 FlyBaseID:FBgn0036830 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_011324.1 Gene:COX13 / 852684 SGDID:S000003159 Length:129 Species:Saccharomyces cerevisiae


Alignment Length:138 Identity:35/138 - (25%)
Similarity:51/138 - (36%) Gaps:37/138 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 SKCPPKVQPVAETSKNKKKLQSCDELLLGKSTRKQKKPLTAIQGGDLGCPGRTGKKPQIVAQHSK 159
            |..||.....|....:|...|...|.|:  :|.|..|                        ..|.
Yeast    11 SSLPPNALKPAFGPPDKVAAQKFKESLM--ATEKHAK------------------------DTSN 49

  Fly   160 LWQKISLFGVLPMIAILTLLVFSTRSE--EERLEFK---------NYEHMYRRTKRYWFKDGNRT 213
            :|.|||::..||.||:..:..:....|  |.|...|         :||.|..|:|.:::.||::|
Yeast    50 MWVKISVWVALPAIALTAVNTYFVEKEHAEHREHLKHVPDSEWPRDYEFMNIRSKPFFWGDGDKT 114

  Fly   214 AFHNSHFN 221
            .|.|...|
Yeast   115 LFWNPVVN 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX6AL2NP_649075.1 Cyt_c_Oxidase_VIa 146..229 CDD:238465 24/87 (28%)
COX13NP_011324.1 COX6A 3..125 CDD:426579 35/138 (25%)

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