DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment COX6AL2 and AT4G37830

DIOPT Version :10

Sequence 1:NP_649075.1 Gene:COX6AL2 / 40066 FlyBaseID:FBgn0036830 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_001329576.1 Gene:AT4G37830 / 829939 AraportID:AT4G37830 Length:174 Species:Arabidopsis thaliana


Alignment Length:137 Identity:32/137 - (23%)
Similarity:51/137 - (37%) Gaps:39/137 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 AKAKASDAAKKATPPKAAKETKVTPPKDETAIAGGSKCPPKVQPVAETSKNKK----KLQSCDEL 120
            |.|....|..:|. .:||.:|.|.|.::.::.||.       ....|.:|.:|    .:.||..|
plant     2 ATAIVRSALSRAV-TRAAPKTSVAPKRNFSSSAGH-------DDAYEAAKWEKITYLGIASCTAL 58

  Fly   121 ---LLGKSTRKQKKPLTAIQGGDLGC------PGRTGKKPQIVAQHSKLWQKISLFGVLPMIA-- 174
               :|.|...         .|.|..|      |.:|.:..|::....||       ..||::.  
plant    59 AVYVLSKGHH---------HGEDPPCETMLISPVKTDRSMQMMRMLRKL-------HFLPLLISF 107

  Fly   175 ILTLLVF 181
            |..:|:|
plant   108 ISFILLF 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX6AL2NP_649075.1 Cyt_c_Oxidase_VIa 146..229 CDD:238465 9/38 (24%)
AT4G37830NP_001329576.1 Cyt_c_Oxidase_VIa 1..>74 CDD:444654 21/88 (24%)

Return to query results.
Submit another query.