DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX6AL2 and COX6AL

DIOPT Version :10

Sequence 1:NP_649075.1 Gene:COX6AL2 / 40066 FlyBaseID:FBgn0036830 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_725504.1 Gene:COX6AL / 246451 FlyBaseID:FBgn0050093 Length:94 Species:Drosophila melanogaster


Alignment Length:87 Identity:37/87 - (42%)
Similarity:50/87 - (57%) Gaps:4/87 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 GKKPQIVAQHSKLWQKISLFGVLPMIAILTLLVFSTRSEEERLEFKNYEHMYRRTKRYWFKDGNR 212
            |..|   |..:.||::::....||.|.:.....|:.....||..|..||::.|||||:.:.||||
  Fly    10 GNMP---ANTAGLWKRVTFLLALPAIVLCAANAFTGHKHVEREPFAKYEYLRRRTKRFPWGDGNR 71

  Fly   213 TAFHNSHFNALPPAGYEDEVDE 234
            :.|||:..||| |.||||||.|
  Fly    72 SLFHNAEVNAL-PEGYEDEVAE 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX6AL2NP_649075.1 Cyt_c_Oxidase_VIa 146..229 CDD:238465 31/80 (39%)
COX6ALNP_725504.1 Cyt_c_Oxidase_VIa 14..87 CDD:238465 29/73 (40%)

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