DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX6AL2 and cox-6A

DIOPT Version :10

Sequence 1:NP_649075.1 Gene:COX6AL2 / 40066 FlyBaseID:FBgn0036830 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_498082.1 Gene:cox-6A / 175693 WormBaseID:WBGene00006519 Length:128 Species:Caenorhabditis elegans


Alignment Length:76 Identity:19/76 - (25%)
Similarity:32/76 - (42%) Gaps:16/76 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MERNNRNEGTHEEEQCSLSDIIYSF------CSENHSELNPLQEIFGVTKNNDHEKHDE--EPDE 57
            |..:|:|...::|   :|::::.:|      .:.|.|.|.     .|.|.:....|.||  ||..
 Worm   152 MNLDNKNAFNNDE---NLNNLMITFTNLGGASNANESGLK-----IGATTSGVKTKVDEDIEPLC 208

  Fly    58 ESYRMAKRQRS 68
            ..|:.|....|
 Worm   209 RHYKCATMDSS 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX6AL2NP_649075.1 Cyt_c_Oxidase_VIa 146..229 CDD:238465
cox-6ANP_498082.1 Cyt_c_Oxidase_VIa 38..122 CDD:238465
Blue background indicates that the domain is not in the aligned region.

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