DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3902 and fadE

DIOPT Version :10

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_414756.2 Gene:fadE / 949007 ECOCYCID:G6105 Length:814 Species:Escherichia coli


Alignment Length:473 Identity:112/473 - (23%)
Similarity:190/473 - (40%) Gaps:99/473 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMNSLKKLPV-----RMLANAARQQSAAMSSAT---------GLPP-------PLTFLTDDEKMM 44
            |..|:...||     :::...:|.:..|:.:.|         |.|.       |...||.:|:..
E. coli    63 MRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDLFQGKPDWKKLHNYPQPRLTAEEQAF 127

  Fly    45 ----KETVAKLAQE--------QIQPLVKKMDFEHKFDPSVVKAVFENGLMGIEIDTELGGSGCN 97
                .|...::|.:        .:.|.:.....||:|...::|             .|.||...:
E. coli   128 LDGPVEEACRMANDFQITHELADLPPELWAYLKEHRFFAMIIK-------------KEYGGLEFS 179

  Fly    98 FMTNIVVVEELSKIDPAVAAFVDIHNTL-VNSLMIKFGNAEQKAKYLPKLAQ-EYAGSFALTEPG 160
            ......|:::||.:...:|..|.:.|:| ...|:..:|..|||..|||:||: :....||||.|.
E. coli   180 AYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTDEQKDHYLPRLARGQEIPCFALTSPE 244

  Fly   161 AGSDAFSLK-----TVAKKDGSHYV---INGSKMWISNSDVAGVF-LIFANAKPE---DGYR--G 211
            |||||.::.     .:.:..|...:   :..:|.:|:.:.:|.|. |.|..:.||   .|..  |
E. coli   245 AGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWNKRYITLAPIATVLGLAFKLSDPEKLLGGAEDLG 309

  Fly   212 ITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDN-------VRVPEENILG---TFGHGYKYA 266
            ||..::...|||:.:.:....|.:        .|.|       |.||.:.|:|   ..|.|::..
E. coli   310 ITCALIPTTTPGVEIGRRHFPLNV--------PFQNGPTRGKDVFVPIDYIIGGPKMAGQGWRML 366

  Fly   267 AGFLNEGR-IGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVATEI----EAA 326
            ...|:.|| |.:.:...|..:....||..|...|:||..:|...:.::..:|.:|...    .||
E. coli   367 VECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAA 431

  Fly   327 RLMTYNAARLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKY----YRDV 387
            .|:||.....::..|    .:|:.||:.:...|::.|..:|..||.|..  ..|..:    |:..
E. coli   432 SLITYGIMLGEKPAV----LSAIVKYHCTHRGQQSIIDAMDITGGKGIM--LGQSNFLARAYQGA 490

  Fly   388 KIGAIYEG----TTNMQL 401
            .|....||    |.:|.:
E. coli   491 PIAITVEGANILTRSMMI 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 SCAD_SBCAD 39..410 CDD:173847 100/414 (24%)
fadENP_414756.2 FadE_coli 3..814 CDD:439499 112/473 (24%)

Return to query results.
Submit another query.