DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3902 and Acox3

DIOPT Version :10

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:XP_063129745.1 Gene:Acox3 / 83522 RGDID:69245 Length:702 Species:Rattus norvegicus


Alignment Length:394 Identity:101/394 - (25%)
Similarity:156/394 - (39%) Gaps:85/394 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 KAVFENGLMGIEIDTELGGSGCNFMTN----IVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGN 135
            |.|||.|....|          :.:.|    :|::..|...|.::|....:|..:..|.:|..| 
  Rat    83 KRVFEYGFFNAE----------DMLKNPLKILVLMNCLGMYDWSLANKCVLHMLVFGSTIIGSG- 136

  Fly   136 AEQKAKYLPKLAQ-EYAGSFALTEPGAGSDAFSLKTVAKKDGS--HYVIN-----GSKMWISN-S 191
            :|...|||.|:.. |..|.|||||...||:..:::|.|..|.:  .::::     .:|.|:.| .
  Rat   137 SEHHFKYLEKIYNLEIFGCFALTELSHGSNTKAMRTTAHYDPATQEFILHSPDFEAAKFWVGNLG 201

  Fly   192 DVAGVFLIFANAKPEDGY-RGITTFIV---DRET----PGLIVNKPEDKLGIRASGTCQLTFDNV 248
            ..|...::||.....||. ||:.:|:|   |.:|    ||::|.....|||..........|..|
  Rat   202 KTATHAVVFAQLYTPDGQCRGLHSFLVQIRDPKTLLPMPGVMVGDMGKKLGQNGLDNGFAMFHKV 266

  Fly   249 RVPEENIL---------GTFGHGYK-------YAAGFLNEGRIG-IAAQMVGLAQGTFDATIPYL 296
            |:|.:|:|         ||:...:|       .:.|.|:.|||. |:..:|.|......| |.:.
  Rat   267 RIPRQNLLDRTGNVTSEGTYNTPFKDVRQRLGASLGSLSSGRISIISISVVNLKLAVIIA-IRFS 330

  Fly   297 LERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAA--------------------------- 334
            ..|:|||      .:.:.:|..:...::..||:.|.||                           
  Rat   331 ATRRQFG------PTDKEEIPVLEYPLQQWRLLPYLAAAYALDHFSKTIFLDLIELQRGRQSGDH 389

  Fly   335 --RLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTT 397
              |..|.|......|:..|..||..|||...:|.:..||.|:.......:...|......|||..
  Rat   390 SDRQAELGREIHALASAGKPLASWTAQRGIQECREACGGHGYLAMNRFGELRNDNDPNCTYEGDN 454

  Fly   398 NMQL 401
            |:.|
  Rat   455 NVLL 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 SCAD_SBCAD 39..410 CDD:173847 101/394 (26%)
Acox3XP_063129745.1 None

Return to query results.
Submit another query.