DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acox3

DIOPT Version :10

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_998312.2 Gene:acox3 / 406421 ZFINID:ZDB-GENE-040426-2163 Length:708 Species:Danio rerio


Alignment Length:421 Identity:98/421 - (23%)
Similarity:159/421 - (37%) Gaps:96/421 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 EHKF-----DPSVVKAVFENGLMGIEIDTELGGSGC------NFMTN----------IVVVEELS 109
            :|.|     ||...:...|:  :.:|...||....|      :|:|.          ||:.:.|.
Zfish    57 QHVFRTLERDPLFARQPGED--VPVEQKRELTFLRCKQLFKYDFITREELMQNPWKMIVLNDCLG 119

  Fly   110 KIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYLPKLAQEYA-GSFALTEPGAGSDAFSLKTVAK 173
            ..|.::.|...::..:..:.::..| :::..|::..:.:... |.|:|||...||:..:|:|.||
Zfish   120 MYDWSLCAKYFLNKGMFGATVLNTG-SQRHLKFVKDIERMMTFGCFSLTELSHGSNTRALRTTAK 183

  Fly   174 KDGS--HYVIN-----GSKMWISN-SDVAGVFLIFANAKPEDG-YRGITTFIV---DRET----P 222
            .|.:  .:|||     .:|.|:.| ...|...::||.....|| ..|:.:|||   |.:|    |
Zfish   184 YDPNTQEFVINSPDFEAAKFWVGNLGKTATHSVVFAQLYTPDGKCHGLHSFIVQVRDPKTLLAMP 248

  Fly   223 GLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGH--------------GYKYAA--GFLN 271
            |::|.....|||..........|.|||:|.||:|...|.              ..::.|  |.|:
Zfish   249 GVMVGDMGKKLGQNGLDNGFAVFHNVRIPRENLLNKTGDVAPDGQYVSPFKDPNKRFGASLGALS 313

  Fly   272 EGRIGIAAQMVGLAQGTFDATIPYLLERKQFGD-----------------------AIYNFQSMQ 313
            .||:||....:...:......:.:...|:|||.                       |:|..:...
Zfish   314 GGRVGITRMALVNLKLAVTVAVRFSATRRQFGPKEDEEIPVLEYQLQQWRLIPFLAAVYALEHFT 378

  Fly   314 HQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGF---- 374
            ...:....|.:...||...:.|..|.|......:..:|...|..|||...:|.:..||.|:    
Zfish   379 KSFSRNFVEFQMGLLMKDKSDRQAELGREIHALSCASKPLGSWTAQRGIQECREACGGHGYLAMN 443

  Fly   375 ----TRDFPQEKYYRDVKIGAIYEGTTNMQL 401
                .||        |......|||..|:.|
Zfish   444 RLGDMRD--------DNDPNCTYEGDNNVLL 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 SCAD_SBCAD 39..410 CDD:173847 98/421 (23%)
acox3NP_998312.2 AXO 27..680 CDD:173839 98/421 (23%)

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