DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and Acoxl

DIOPT Version :10

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001402606.1 Gene:Acoxl / 296138 RGDID:1306814 Length:656 Species:Rattus norvegicus


Alignment Length:370 Identity:86/370 - (23%)
Similarity:147/370 - (39%) Gaps:59/370 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 NFMT-NIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYL-PKLAQEYAGSFALTEP 159
            ||:: :.|:.|.|..:|.:::....:...|....:...|:.|...|:. |...|:|.|.||:||.
  Rat    81 NFISQSFVLGEVLCMVDVSMSIKCGVIFLLFGGAVNNLGSPEHVIKWFRPLKEQKYTGMFAMTEK 145

  Fly   160 GAGSDAFSLKTVA--KKDGSHYVI-----NGSKMWISNSDVAGVFLIFANAKPEDGYRGITTFIV 217
            |.||:...::|.|  ..|...:||     |..||:|.|:.......:||....|...:|...|||
  Rat   146 GHGSNIRGIQTEATFDCDSQEFVIDMPCENAQKMYIGNAMHGNYAAVFAQLIIEGKSQGPHCFIV 210

  Fly   218 D-RET-----PGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFG--------HG------ 262
            . |:.     ||:.......|.|:.......|.||.||:|.||:|...|        |.      
  Rat   211 PIRDENGNLYPGVTAIDMMYKEGLNGVDNGILIFDKVRIPRENMLDKLGSVTPDGQYHSPIQSKS 275

  Fly   263 --YKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVATEIEA 325
              :......|...|:.:..|.:|..:......|.|...|:|||      ...:.::..:..:::|
  Rat   276 ARFNAMLAILTPSRLAVTFQAMGAMKLGLMIAIRYSHSRRQFG------PKGKEEVKIIEHQMQA 334

  Fly   326 ARLMTY------------NAARLQEQGVPFQKE--------AAMA--KYYASEVAQRAAIKCVDW 368
            .|||::            :|..:.::.:...:|        |.||  |.|::....|....|.:.
  Rat   335 LRLMSHLATALALTFTSRHAGHILDEDILQGRELINRRSLQALMAGLKAYSTWETVRCLQDCREC 399

  Fly   369 MGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKKDYA 413
            .||:|:..:........|..:...:||...:.|..:|:.:...|:
  Rat   400 TGGMGYMMENRLSGLKCDTDVFVTFEGDNVVMLQVVARELLAQYS 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 SCAD_SBCAD 39..410 CDD:173847 85/365 (23%)
AcoxlNP_001402606.1 ACAD 26..625 CDD:447864 86/370 (23%)

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