DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and Gcdh

DIOPT Version :10

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_032123.3 Gene:Gcdh / 270076 MGIID:104541 Length:447 Species:Mus musculus


Alignment Length:457 Identity:127/457 - (27%)
Similarity:217/457 - (47%) Gaps:74/457 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SLKKLPVRMLANAAR----------QQSAAMSSATGLPP------------PLTF---LTDDEKM 43
            ||:.:..|:|:..:.          ..:||.:..|.:.|            ||..   ||.|||:
Mouse    11 SLRGVSARLLSRRSGLRFPRFPRTWSSAAAHTEKTQIRPAKSSRPVFDWKDPLILEEQLTADEKL 75

  Fly    44 MKETVAKLAQEQIQPLVKKMDFEHKFDPSVVKAVFENGLMGIEIDTELGGSGCNFMTNI---VVV 105
            :::|.....||::...:...:....|...:|..:.|.|::|..|.    |.||..::::   ::.
Mouse    76 IRDTFRNYCQERLMSRILLANRNEVFHRDIVYEMGELGVLGPTIK----GYGCAGVSSVAYGLLT 136

  Fly   106 EELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYLPKLAQ-EYAGSFALTEPGAGSDAFSLK 169
            .||.::|....:.:.:.::||...:..:|:.||:.||||.||: |..|.|.||||..|||...::
Mouse   137 RELERVDSGYRSMMSVQSSLVMHPIYTYGSEEQRQKYLPGLAKGELLGCFGLTEPNHGSDPGGME 201

  Fly   170 TVAKKDGSH--YVINGSKMWISNSDVAGVFLIFANAKPEDGYRGITTFIVDRETPGLIVNKPEDK 232
            |.|:.:.|:  |.::|:|.||:||.||.:|:::|..: ::..||   ||:::...||...:.|.|
Mouse   202 TRARHNPSNQSYTLSGTKTWITNSPVADLFIVWARCE-DNCIRG---FILEKGMRGLSAPRIEGK 262

  Fly   233 LGIRASGTCQLTFDNVRVPEENIL-------GTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFD 290
            ..:|||.|..:..|:|.|||||:|       |.|        |.||..|.||...::|.|:....
Mouse   263 FSLRASATGMIIMDSVEVPEENVLPNVSSLAGPF--------GCLNTARYGITWGVLGAAEFCLH 319

  Fly   291 ATIPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMAKY--- 352
            ....|.|:|.|||..:...|.:|.::|.:.|||...........||::|.....:..:|.|.   
Mouse   320 TARQYALDRIQFGVPLARNQLVQKKLADMLTEITLGLHACLQLGRLKDQDKATPEMVSMLKRNNC 384

  Fly   353 -YASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGT------------TNMQLSTI 404
             .|.::|::|.    |.:||.|.:.::...::..:::....||||            |.:|..|:
Mouse   385 GKALDIARQAR----DILGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAITGIQAFTV 445

  Fly   405 AK 406
            .|
Mouse   446 GK 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 SCAD_SBCAD 39..410 CDD:173847 115/397 (29%)
GcdhNP_032123.3 GCD 57..443 CDD:173840 117/405 (29%)

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