DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and Acadvl

DIOPT Version :10

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_037023.1 Gene:Acadvl / 25363 RGDID:2014 Length:655 Species:Rattus norvegicus


Alignment Length:427 Identity:140/427 - (32%)
Similarity:221/427 - (51%) Gaps:26/427 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SLKKLPVRMLANAARQQSAAMSSATG-------LPPPLTFLTDDEKMMKETVAKLAQ--EQIQPL 59
            |.::.|.|     |..:|.|:....|       .|.|........:.:||.|..:|:  |::...
  Rat    60 STREKPAR-----AESKSFAVGMFKGQLTTDQVFPYPSVLNEGQTQFLKELVGPVARFFEEVNDP 119

  Fly    60 VKKMDFEHKFDPSVVKAVFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKIDPAVAAFVDIHNT 124
            .|....| |.:...::.:.|.|..|:::.:||||.|.:......:.|.:...|..|:..:..|.:
  Rat   120 AKNDSLE-KVEEDTLQGLKELGAFGLQVPSELGGLGLSNTQYARLAEIVGMHDLGVSVTLGAHQS 183

  Fly   125 LVNSLMIKFGNAEQKAKYLPKLAQEYA-GSFALTEPGAGSDAFSLKT--VAKKDGSHYVINGSKM 186
            :....::.:|...||.||||::|...| .:|.||||.:|||..|:::  |....|.:|.:||||:
  Rat   184 IGFKGILLYGTKAQKEKYLPRVASGQALAAFCLTEPSSGSDVASIRSSAVPSPCGKYYTLNGSKI 248

  Fly   187 WISNSDVAGVFLIFANAKPEDGYRG-----ITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFD 246
            ||||..:|.:|.:||....:|...|     ||.|:|:|...|:....||.|:||:||.|.::.||
  Rat   249 WISNGGLADIFTVFAKTPIKDAATGAVKEKITAFVVERSFGGVTHGLPEKKMGIKASNTSEVYFD 313

  Fly   247 NVRVPEENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQS 311
            .|:||.||:||..|.|:|.|...||.||.|:||.:.|..:......:.:...|.||||.|:||..
  Rat   314 GVKVPAENVLGEVGDGFKVAVNILNNGRFGMAATLAGTMKAIIAKAVDHATNRTQFGDKIHNFGV 378

  Fly   312 MQHQIATVATEIEAARLMTYNAARLQEQGV-PFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFT 375
            :|.::|.:|........|.|..:...:||. .||.|||::|.:.||.|.:...:|:..|||:||.
  Rat   379 IQEKLARMAILQYVTESMAYMLSANMDQGFKDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFM 443

  Fly   376 RDFPQEKYYRDVKIGAIYEGTTNMQLSTIA--KCIKK 410
            ::...|:..||::|..|:|||.::....:|  .|:.|
  Rat   444 KEPGVERVLRDIRIFRIFEGTNDILRLFVALQGCMDK 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 SCAD_SBCAD 39..410 CDD:173847 130/383 (34%)
AcadvlNP_037023.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 4/14 (29%)
Catalytic. /evidence=ECO:0000250|UniProtKB:P49748 41..482 140/427 (33%)
VLCAD 72..481 CDD:173850 136/410 (33%)
Membrane-anchoring. /evidence=ECO:0000250|UniProtKB:P49748 483..516
Blue background indicates that the domain is not in the aligned region.

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