DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and Ivd

DIOPT Version :10

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_036724.1 Gene:Ivd / 24513 RGDID:2936 Length:424 Species:Rattus norvegicus


Alignment Length:425 Identity:145/425 - (34%)
Similarity:226/425 - (53%) Gaps:27/425 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LANAARQQSAAMSS--ATGLPPPLTF----------------LTDDEKMMKETVAKLAQEQIQPL 59
            :|.|.|.....:||  ...||.||..                |.:::|.::.|::|..||.:.|.
  Rat     1 MATAVRLLGRRVSSWRLRPLPSPLAVPQRAHSMLPVDDDINGLNEEQKQLRHTISKFVQENLAPK 65

  Fly    60 VKKMDFEHKFD--PSVVKAVFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKIDPAVAAFVDIH 122
            .:::|..:.|.  ....|.:...|::||....:.||||..::.:::|:||:|:...||......|
  Rat    66 AQEIDQSNDFKNLREFWKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASAAVGLSYGAH 130

  Fly   123 NTLVNSLMIKFGNAEQKAKYLPKL-AQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKM 186
            :.|..:.:::.||..||.|||||| :.|:.|:.|::||.||||..|::..|:|.|.|||:||:|.
  Rat   131 SNLCINQIVRNGNEAQKEKYLPKLISGEFIGALAMSEPNAGSDVVSMRLKAEKKGDHYVLNGNKF 195

  Fly   187 WISNSDVAGVFLIFA----NAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDN 247
            ||:|...|.|.:::|    .|.|..  ||||.|||:::.||...:|..||||:|.|.||:|.|::
  Rat   196 WITNGPDADVLVVYAKTDLTAVPAS--RGITAFIVEKDMPGFSTSKKLDKLGMRGSNTCELVFED 258

  Fly   248 VRVPEENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSM 312
            .:||..|||.....|.......|:..|:.:|...:|:.|...|.|||||..|:.||..|..||.|
  Rat   259 CKVPAANILSQESKGVYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLM 323

  Fly   313 QHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRD 377
            |.::|.:.|.:.|.|...||.||..::|....|:.|....|.:|.|.:.|:..:..:||.|:..|
  Rat   324 QGKMADMYTRLMACRQYVYNVARACDEGHITAKDCAGVILYTAECATQVALDGIQCLGGNGYIND 388

  Fly   378 FPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKKDY 412
            ||..::.||.|:..|..||:.::...|.:....|:
  Rat   389 FPMGRFLRDAKLYEIGGGTSEVRRLVIGRAFNADF 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 SCAD_SBCAD 39..410 CDD:173847 134/377 (36%)
IvdNP_036724.1 IVD 42..421 CDD:173845 135/380 (36%)

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