DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3902 and acds-10

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_504508.1 Gene:acds-10 / 178962 WormBaseID:WBGene00019599 Length:985 Species:Caenorhabditis elegans


Alignment Length:441 Identity:117/441 - (26%)
Similarity:190/441 - (43%) Gaps:58/441 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VRMLANAARQQ------SAAMSSATGLPPPLTFLTDDEKMMK--ETVAKLAQEQIQPLVKKM--- 63
            ||.||....|.      |.:....|.:|..::.     |..|  |.|.::.|..:.||.:::   
 Worm   552 VRKLAAEGMQMISKVHASKSYGQLTIIPSGMSL-----KAQKYYEIVREIIQNDVIPLEQELLEY 611

  Fly    64 --DFEHKF---DPSVVKAVFENGLMGI-------EIDTELG-GSG---------CNFMTNIVVVE 106
              :..|::   .|.:.|...::..:|.       .||.|.. |.|         |..|...:...
 Worm   612 YEEGPHRWTIPHPKIEKLKEKSKSLGAWNLFISEHIDPEQKYGKGLTNVEYAHICELMGRSIFAP 676

  Fly   107 ELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYL-PKLAQEYAGSFALTEPG-AGSDAFSLK 169
            |:..........:::        :||:|:.|||:|:| |.|..|....||:|||. |.|||.:::
 Worm   677 EVFNCQAPDTGNMEV--------LIKYGSEEQKSKWLTPLLNGEIKSCFAMTEPDVASSDATNIQ 733

  Fly   170 TVAKKDGSHYVINGSKMWISNSD-----VAGVFLIFANAKPEDGYRGITTFIVDRETPGLIVNKP 229
            ....:.|:.|:||..|.:|||:.     :| :|:...:..........:..:|..:|.|:.:.:.
 Worm   734 GSIVRVGNEYIINARKWFISNASHPKCRIA-IFMGQVSGAKRSRNLQQSMILVPMQTEGVKIIRN 797

  Fly   230 EDKLGIR--ASGTCQLTFDNVRVPEENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDAT 292
            ....|.:  ..|..::||.|||||..|:|...|.|::.|.|.|..|||..|.:::|.|:...|..
 Worm   798 THVFGSQDAPGGHPEITFTNVRVPVGNMLLGEGKGFEIAQGRLGPGRIHHAMRLIGHAERAIDVI 862

  Fly   293 IPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQGVP--FQKEAAMAKYYAS 355
            ...||.|..||..:..|.|::.::|....|:|.|||:...||.:.:...|  .:.|.||.|..|.
 Worm   863 KDRLLTRIAFGRKLVQFDSLRKELALSRCEVEQARLLVLKAAHMIDTVGPKEAKSEIAMIKVVAP 927

  Fly   356 EVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAK 406
            .:|.....:.:...|..|.|...|...:|...:...|.:|...:.|.||||
 Worm   928 NMAISILDRAMQQQGARGLTPFTPLASFYVWARSLRIADGPDAVHLETIAK 978

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 109/408 (27%)
SCAD_SBCAD 39..410 CDD:173847 109/406 (27%)
acds-10NP_504508.1 HAD-1A3-hyp 2..212 CDD:274054
HAD_like <96..200 CDD:304363
PLN02876 250..982 CDD:215473 117/441 (27%)
ACAD10_11_N-like 250..503 CDD:270703
ACAD_FadE2 585..982 CDD:173844 109/403 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.