DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acdh-5

DIOPT Version :10

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_491942.1 Gene:acdh-5 / 172400 WormBaseID:WBGene00016491 Length:442 Species:Caenorhabditis elegans


Alignment Length:415 Identity:118/415 - (28%)
Similarity:206/415 - (49%) Gaps:13/415 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NSLKKLPVRMLANAARQQSAAMSSA---TGLPPPLTFLTDDEK--MMKETVAKLAQEQIQPLVKK 62
            |:|.|.....|.|..|..|.|::|.   :..|.....:..||.  :|::::.||.:|:|.|.|.|
 Worm    20 NNLNKFRSSNLGNQRRSVSVAVTSTSPKSEKPVAREHMIYDETHFVMQKSLGKLIEEKINPNVAK 84

  Fly    63 MDFEHKFDPSVV-KAVFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKID-PAVAAFVDIHNTL 125
            .:.:.::...:| |.:.::|:.|:......||:|.:......:.|::..|: .::...|.:...:
 Worm    85 WEQDGRYPAHLVFKMLGDHGVFGVNKPEAFGGTGTDIAMATAIAEQMGAINCGSIPMSVMVQTDM 149

  Fly   126 VNSLMIKFGNAEQKAKYL-PKLAQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWIS 189
            ....:.:||:...:.::| |.:..:...|.|::||.||||..::.|.|::.||..:||||||||:
 Worm   150 STPALAQFGSDALRERFLRPSITGDLVSSLAVSEPHAGSDVSAVHTHARRQGSDLIINGSKMWIT 214

  Fly   190 NSDVAGVFLIFAN-AKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEE 253
            |...|....:..| :...:.::..:...|..:..|:..:.|.||||:|:|.|.||.|::||||..
 Worm   215 NGGQADWACVLVNTSNTSNVHKNKSLVCVPLDAVGVHRSTPLDKLGMRSSDTVQLFFEDVRVPSS 279

  Fly   254 NILGTFGHGYKYAAGFLNEGRIGIAAQMVGL--AQGTFDATIPYLLERKQFGDAIYNFQSMQHQI 316
            .|:|..|.|:.|.....|:.|:...|  |||  .|...|.||.|..:|..||..:.:.|.:|.|:
 Worm   280 YIIGEEGRGFGYQMKQFNDERLVTVA--VGLLPLQKCIDETIEYARDRLLFGKTLLDQQYIQFQL 342

  Fly   317 ATVATEIEAARLMTYNAARLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQE 381
            |.:..|:||.|.:.|.....:.:|.......||||.....:|:....:|:...||.|:..:....
 Worm   343 AELEAELEATRALLYRTVLARSRGDDVSMLTAMAKLKIGRLARAITDQCLQVWGGAGYLNENGIS 407

  Fly   382 KYYRDVKIGAIYEGTTNMQLSTIAK 406
            :.:||.::.:|..|...:.:..|.|
 Worm   408 RAFRDFRLFSIGAGCDEVMMRIIHK 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 SCAD_SBCAD 39..410 CDD:173847 108/376 (29%)
acdh-5NP_491942.1 CaiA 66..442 CDD:441563 106/369 (29%)

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