DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3902 and Acox1

DIOPT Version :10

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_056544.2 Gene:Acox1 / 11430 MGIID:1330812 Length:661 Species:Mus musculus


Alignment Length:474 Identity:97/474 - (20%)
Similarity:164/474 - (34%) Gaps:119/474 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RQQSAAMSSATGLPPPLTFLTDDEKMMKETVAKLAQEQIQPLV-KKMDFEH----------KFDP 71
            |::.||   ||..|..:|.:.|..   .|...:  :.:|:.|: ...||:|          :::.
Mouse     6 RKERAA---ATFNPELITHILDGS---PENTRR--RREIENLILNDPDFQHEDYNFLTRSQRYEV 62

  Fly    72 SVVKAVFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKIDPAVAAF------------VDIH-N 123
            :|.|:.                      |.:..:.|....||....:            :|:| .
Mouse    63 AVKKSA----------------------TMVKKMREFGIADPEEIMWFKNSVHRGHPEPLDLHLG 105

  Fly   124 TLVNSLMIKFGNAEQKAKYLPKLAQEYAGSFALTEPGAGSDAFSLKTVAKKD--GSHYVINGS-- 184
            ..:.:|:.:....:|:..::|....|..|::|.||.|.|:....|:|.|..|  ...:::|..  
Mouse   106 MFLPTLLHQATEEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTV 170

  Fly   185 ---KMW------ISNSDVAGVFLIFANAKPEDGYRGITTFIV-------DRETPGLIVNKPEDKL 233
               |.|      .||..:     :.|.........|:..|:|       .:..||:.|.....|.
Mouse   171 TSIKWWPGGLGKTSNHAI-----VLAQLITRGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKF 230

  Fly   234 GIRASGTCQLTFDNVRVPEENIL---------GTFGH--GYKYAAG---FLNEGRIGIAAQMVGL 284
            |........|..||.|:|.||:|         ||:..  ..|...|   |:....:|.|||.:..
Mouse   231 GYEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGSAAQSLSK 295

  Fly   285 AQGTFDATIPYLLERKQF-------GDAIYNFQSMQHQIATVATEIEAARLM------TYNAARL 336
            |   ....|.|...|:|.       ...|.:||:.|:::..:.....|...:      ||  .|:
Mouse   296 A---CTIAIRYSAVRRQSEIKRSEPEPQILDFQTQQYKLFPLLATAYAFHFLGRYIKETY--MRI 355

  Fly   337 QE---QG----VP-FQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIY 393
            .|   ||    :| .....|..|.:.:..|.....:|....||.|::........|........:
Mouse   356 NESIGQGDLSELPELHALTAGLKAFTTWTANAGIEECRMACGGHGYSHSSGIPNIYVTFTPACTF 420

  Fly   394 EGTTNMQLSTIAKCIKKDY 412
            ||...:.:...|:.:.|.|
Mouse   421 EGENTVMMLQTARFLMKIY 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 SCAD_SBCAD 39..410 CDD:173847 88/449 (20%)
Acox1NP_056544.2 AXO 3..638 CDD:173839 97/474 (20%)

Return to query results.
Submit another query.