DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6865 and Klkb1

DIOPT Version :10

Sequence 1:NP_001246825.1 Gene:CG6865 / 40050 FlyBaseID:FBgn0036817 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_036857.2 Gene:Klkb1 / 25048 RGDID:67382 Length:638 Species:Rattus norvegicus


Alignment Length:289 Identity:97/289 - (33%)
Similarity:153/289 - (52%) Gaps:43/289 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 AQSQIAFSNQPCSV---------RNPKIVGGSEAERNEMPYMVSLMRR---GGHFCGGTIISERW 69
            ||....:|.:.|.|         .|.:||||:.:...|.|:.|||..:   ..|.|||:||..:|
  Rat   364 AQGSSGYSLRLCKVVESSDCTTKINARIVGGTNSSLGEWPWQVSLQVKLVSQNHMCGGSIIGRQW 428

  Fly    70 ILTAGHCICNGLQQFMKPAQIQGVVGLHSIREYLNGIGNGPDALRVDF---KNIVPHPQYDCNDV 131
            ||||.||. :|: .:....:|.|  |:.::.|..|         :..|   |.::.|.:|..::.
  Rat   429 ILTAAHCF-DGI-PYPDVWRIYG--GILNLSEITN---------KTPFSSIKELIIHQKYKMSEG 480

  Fly   132 KHDIALLELVQPIRFSSHIQPSCVGSEEGHRSLEQEYGT--VSGWGWTHENQAENDRSDVLRKAT 194
            .:||||::|..|:.::...:|.|:.|:....::   |..  |:|||:|.|   ..:..::|:|||
  Rat   481 SYDIALIKLQTPLNYTEFQKPICLPSKADTNTI---YTNCWVTGWGYTKE---RGETQNILQKAT 539

  Fly   195 VKIWNNEACERSYRSLGKSNTIGETQLCAGYENGQIDSCWADSGGPLMSKEH---HLVGVVSTGI 256
            :.:..||.|::.||..    .|.:..:||||:.|.||:|..||||||:.|..   .|||:.|.|.
  Rat   540 IPLVPNEECQKKYRDY----VITKQMICAGYKEGGIDACKGDSGGPLVCKHSGRWQLVGITSWGE 600

  Fly   257 GCARPGLPGIYTRVSKYVSWMQKVIDGRK 285
            ||||...||:||:|::|:.|:.:.|...|
  Rat   601 GCARKEQPGVYTKVAEYIDWILEKIQSSK 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6865NP_001246825.1 Tryp_SPc 34..276 CDD:214473 88/252 (35%)
Klkb1NP_036857.2 APPLE 21..104 CDD:128519
APPLE 111..194 CDD:128519
APPLE 201..284 CDD:128519
APPLE 292..375 CDD:128519 3/10 (30%)
Tryp_SPc 391..621 CDD:238113 88/252 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.