DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg3 and ATG3

DIOPT Version :10

Sequence 1:NP_649059.1 Gene:Atg3 / 40044 FlyBaseID:FBgn0036813 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_568934.1 Gene:ATG3 / 836271 AraportID:AT5G61500 Length:313 Species:Arabidopsis thaliana


Alignment Length:345 Identity:157/345 - (45%)
Similarity:199/345 - (57%) Gaps:58/345 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QSVLNTVKGTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDETKTKPY 66
            |.:....|||    .|.:|.....|.|:|.|||:..|||.|||:||..||||.|.:||.:|.|||
plant     5 QKLHEAFKGT----VERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDASKRKPY 65

  Fly    67 LPKDKQFLITRNVPCYRR----CKQMEYVGEETLVEEESGDGGWVETH-QLNDDGTTQLEDKICE 126
            ||.||||||||||||.||    .:..|..|.|.||::|..| ||:.|| :..|.|          
plant    66 LPSDKQFLITRNVPCLRRAASVAEDYEAAGGEVLVDDEDND-GWLATHGKPKDKG---------- 119

  Fly   127 LTMEETKEEMHTPDSD----------KSAPGAGGQAEDEDDDEAIDMDDFEESGMLELVDPAVAT 181
                  |||.:.|..|          :|.|...|   .|:||:..||::|:|:..:...|||...
plant   120 ------KEEDNLPSMDALDINEKNTIQSIPTYFG---GEEDDDIPDMEEFDEADNVVENDPATLQ 175

  Fly   182 TTR--KPEPEAKASPVAAASGDAEASGDSVLHTRTYDLHISYDKYYQTPRLWVVGYDEQRKPLTV 244
            :|.  ..||:                .|::|.||||||.|:|||||||||:|:.||||.|..|..
plant   176 STYLVAHEPD----------------DDNILRTRTYDLSITYDKYYQTPRVWLTGYDESRMLLQP 224

  Fly   245 EQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGGGQLGVHLYLIIFL 309
            |.:.||||||||:||||:|.||||||.: ||||||||..:|||||..:...|.:..|..||.:||
plant   225 ELVMEDVSQDHARKTVTIEDHPHLPGKH-ASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFL 288

  Fly   310 KFVQTVIPTIEYDFTQNFNM 329
            ||:.:||||||||:|.:|::
plant   289 KFMASVIPTIEYDYTMDFDL 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg3NP_649059.1 Autophagy_act_C <210..323 CDD:461120 72/112 (64%)
ATG3NP_568934.1 Autophagy_act_C 37..302 CDD:461120 142/301 (47%)

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