DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atg3 and atg3

DIOPT Version :10

Sequence 1:NP_649059.1 Gene:Atg3 / 40044 FlyBaseID:FBgn0036813 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_956316.1 Gene:atg3 / 336632 ZFINID:ZDB-GENE-030131-8576 Length:317 Species:Danio rerio


Alignment Length:334 Identity:208/334 - (62%)
Similarity:263/334 - (78%) Gaps:22/334 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQSVLNTVKGTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDETKTKP 65
            ||:|:|:||||||.|||:||||||||||:||||:|||||||||||||||||||:||:|:|.|.||
Zfish     1 MQNVINSVKGTALGVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWASGEEAKVKP 65

  Fly    66 YLPKDKQFLITRNVPCYRRCKQMEYVGE-ETLVEEESGDGGWVETHQLNDDGTTQLEDKICELTM 129
            |||.|||||:|||||||:|||||||..| |.::||:.||||||:|  .::.|.|.:.:.:.|:::
Zfish    66 YLPNDKQFLLTRNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDT--FHNSGVTGVTEAVREISL 128

  Fly   130 EETKEEMHTPDSDKSAPGAGGQAEDEDDD---EAIDMDDFEESGMLELVDPAVATTTRKPEPEAK 191
             :.|:.|:.    ....||.|.:.|:|||   ||.||:::||||:||..|..:.|:......:.|
Zfish   129 -DNKDNMNM----NVKTGACGNSGDDDDDEEGEAADMEEYEESGLLETDDATLDTSKMADLSKTK 188

  Fly   192 ASPVAAASGDAEASG-DSVLHTRTYDLHISYDKYYQTPRLWVVGYDEQRKPLTVEQMYEDVSQDH 255
                      |||.| |::|.||||||:|:|||||||||||:.||||.|:||||:|||||:||||
Zfish   189 ----------AEAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEDRQPLTVDQMYEDISQDH 243

  Fly   256 AKKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGGGQLGVHLYLIIFLKFVQTVIPTIE 320
            .|||||:|:||:||.|.|.||||||||::|||||:||.||||:||||:||:|||||||.||||||
Zfish   244 VKKTVTIENHPNLPPPAMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQAVIPTIE 308

  Fly   321 YDFTQNFNM 329
            ||:|::|.|
Zfish   309 YDYTRHFTM 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg3NP_649059.1 Autophagy_act_C <210..323 CDD:461120 88/112 (79%)
atg3NP_956316.1 Membrane-curvature-sensing motif. /evidence=ECO:0000250|UniProtKB:Q9CPX6 4..19 11/14 (79%)
LIR motif. /evidence=ECO:0000250|UniProtKB:Q9NT62 104..110 5/5 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 137..165 11/27 (41%)
Autophagy_act_C 162..311 CDD:461120 102/158 (65%)

Return to query results.
Submit another query.