DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG16775 and Traip

Sequence 1:NP_649022.2 Gene:CG16775 FlyBaseID:FBgn0036767 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001102474.1 Gene:Traip RGDID:1309761 Length:469 Species:Rattus norvegicus

Alignment Length:24 Identity:9/25 (36%)
Similarity:13/25 (52%) Gaps:1/25 (4%)


  Fly   112 DGFREKNA-VSVGTNALSERVFIC 134
            |...|:|| |....|||::...:|
  Rat   109 DTLEERNATVESLQNALNKAEMLC 132

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG16775NP_649022.2 DM9 29..100 CDD:128937
DUF3421 51..164 CDD:288732 9/25 (36%)
DM9 104..175 CDD:128937 9/25 (36%)
TraipNP_001102474.1 zf-RING_2 7..50 CDD:290367
BAR 106..>264 CDD:299863 9/25 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0001331
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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