DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG16775 and TRAIP

Sequence 1:NP_649022.2 Gene:CG16775 FlyBaseID:FBgn0036767 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_005870.2 Gene:TRAIP HGNCID:30764 Length:469 Species:Homo sapiens

Alignment Length:152 Identity:34/153 (22%)
Similarity:56/153 (37%) Gaps:41/153 (27%)


  Fly    25 VYSYEDKWVYLDKTLDLPEEAILGGVDPDGYYTYVGRVTYSSNILPARVVPELG----------- 78
            :.|.:.|...|.:||:||..|          ...|.|:...|   ||.|...|.           
Human   264 IMSLKKKLTMLQETLNLPPVA----------SETVDRLVLES---PAPVEVNLKLRRPSFRDDID 315

  Fly    79 -KATYNTDT-----LGNQATTYEVLV---SNATVGYHWIRSFDGFREKNAVSVGTNALSERVFIC 134
             .||::.||     ..:|...||.|.   |::.:.....:...|.|:::.:|:|..:       |
Human   316 LNATFDVDTPPARPSSSQHGYYEKLCLEKSHSPIQDVPKKICKGPRKESQLSLGGQS-------C 373

  Fly   135 RVRCDESIFIGTLYLSKRMCIV 156
            ....||.: :|...:..|..|:
Human   374 AGEPDEEL-VGAFPIFVRNAIL 394

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG16775NP_649022.2 DM9 29..100 CDD:128937 23/91 (25%)
DUF3421 51..164 CDD:288732 26/127 (20%)
DM9 104..175 CDD:128937 10/54 (19%)
TRAIPNP_005870.2 RING-H2_TRAIP 6..50 CDD:319394
RING-H2 finger (C3H2C3-type) 7..49 CDD:319394
SMC_N <68..>279 CDD:330553 5/15 (33%)
Interaction with CYLD. {ECO:0000269|PubMed:14676304} 211..469 34/153 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0001331
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.000

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