DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5506 and CG13321

DIOPT Version :10

Sequence 1:NP_649021.1 Gene:CG5506 / 39992 FlyBaseID:FBgn0036766 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_610831.1 Gene:CG13321 / 36430 FlyBaseID:FBgn0033787 Length:286 Species:Drosophila melanogaster


Alignment Length:163 Identity:52/163 - (31%)
Similarity:67/163 - (41%) Gaps:23/163 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 AYAV---PSTYDTEHVWKAGNLSYVIPYNAVVGGFDPYGFTTYVGRVKYSNSILPARVVAETGTA 76
            ||.|   |.|      |.|.:...::| ..||||.|..|...||||..:...:|||:|:...|.|
  Fly   138 AYEVLVQPET------WIASSGRGIVP-GTVVGGHDADGDQIYVGRAYHEGDLLPAKVIPNKGCA 195

  Fly    77 YF---NTETTSSKLLVYDILVAERDVNYVWVRSFDGFYEKGAVAVGTTVKNERVFCCRAKTDGGI 138
            |.   ..|.....   |::|..   ..|.||....|.....||..|.|...|.:|..||...|.:
  Fly   196 YVPYGGGEVVKHD---YELLAG---YGYGWVHDSHGNVPGNAVLCGRTSDGEPLFIGRAHHHGSL 254

  Fly   139 LIGTLLLSSQKVCI-IKHESLALRKFDKYEVLV 170
            ..|.:..|..  |: |..:...:| .|.|||||
  Fly   255 TPGKIHQSHH--CLYIPFDGEEVR-IDHYEVLV 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5506NP_649021.1 DUF3421 48..161 CDD:463390 32/116 (28%)
CG13321NP_610831.1 DUF3421 26..135 CDD:463390
DUF3421 168..277 CDD:463390 33/117 (28%)
Blue background indicates that the domain is not in the aligned region.

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