DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps60 and VPS60.1

DIOPT Version :10

Sequence 1:NP_648997.1 Gene:Vps60 / 39964 FlyBaseID:FBgn0036740 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_187675.2 Gene:VPS60.1 / 820233 AraportID:AT3G10640 Length:235 Species:Arabidopsis thaliana


Alignment Length:233 Identity:101/233 - (43%)
Similarity:147/233 - (63%) Gaps:17/233 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNRLFGRGKPKEPGPSLNDCIAGVDARATNIEEKISNLEAELRKYREQMSKMREGPAKNSVKQKA 65
            |.|:||..|..||.||:.|....::.|..::|:||..|:.||.||:||:.|.|.|||:.:||.:|
plant     1 MRRVFGAKKNTEPPPSIQDASDRINKRGDSVEDKIKKLDVELCKYKEQLKKTRPGPAQEAVKARA 65

  Fly    66 LRVLKQKKAYEQQAESLRNQSFNMEQANYAAQSLKDTQATVAAMKDGVKQMKTEYKKINIDQIED 130
            :|||||||.||.|.:.|.||:||::|.::||:.|||.|.|:.|:|...|::|...|.:.|..|::
plant    66 MRVLKQKKMYEGQRDMLYNQTFNLDQVSFAAEGLKDAQQTMTALKSANKELKGMMKTVKIQDIDN 130

  Fly   131 IQDDMADMFEQADEVQEALGRTYGMPE-VDDDDLQAELDAL----GDEIALDDDTSYL------- 183
            :||:|.|:.:.:.|:||:|||:|.:|: :|:|||..|||||    |:|...|...|||       
plant   131 LQDEMMDLMDVSSEIQESLGRSYNIPDGLDEDDLMGELDALEADMGNETEADGMPSYLQPDTETD 195

  Fly   184 -DDVVKAPEAPSREPGADSIVPGKSTIETDEFGLPKIP 220
             |..:..|.||:...||..   |::..| ||||||.:|
plant   196 YDSELNLPAAPTGHNGAPH---GRAQAE-DEFGLPAVP 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps60NP_648997.1 PTZ00464 1..190 CDD:473916 87/201 (43%)
VPS60.1NP_187675.2 PTZ00464 1..195 CDD:473916 86/193 (45%)

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