DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7542 and Tmprss11d

DIOPT Version :10

Sequence 1:NP_648995.3 Gene:CG7542 / 39960 FlyBaseID:FBgn0036738 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:260 Identity:85/260 - (32%)
Similarity:127/260 - (48%) Gaps:23/260 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLVGSCTAVP-LLTDVEPYITNGEPAEVGQFPYQAGLNVSFGNWSTWCGGTLISHYWIITAAHCM 72
            :|...|.|.| |:|..|..|..|..||.|.:|:|..|.:   |....|||||||:.|::|||||.
  Rat   167 VLTQECGARPDLITLSEERIIGGTQAETGDWPWQVSLQL---NNVHHCGGTLISNLWVLTAAHCF 228

  Fly    73 ---DGAESVTVYLGAINIGDESEEGQERIMVEKSGIIVHSNYMASTVVNDISLIRLPAFVGFTDR 134
               ...:..|...|...|       ..|:.|....|:.|:.|.:.|..|||::::|...|.||..
  Rat   229 RSYSNPQQWTATFGVSTI-------SPRLRVRVRAILAHAEYNSITRDNDIAVVQLDRPVTFTRN 286

  Fly   135 IRAASLPRRLNGQFPTYESIRAFASGWGRESDASDSVSPVLRYVEMPIMPHSLCR--MYWSGAVS 197
            |....||.......|  :|: |:.:|||..:...::|:. |:..|:.|:...:|.  ..:.|:|.
  Rat   287 IHRVCLPAATQNIIP--DSV-AYVTGWGSLTYGGNTVTN-LQQGEVRIVSSEVCNEPAGYGGSVL 347

  Fly   198 EKMICMSTTSGK-STCHGDSGGPLVYKQGNSS-YLIGSTSFGTSMGCQVGFPAVFTRISSYLDWI 260
            ..|:|....||. ..|.||||||||.:..... :::|..|:|...|.. ..|.|:||:::|.:||
  Rat   348 PGMLCAGVRSGAVDACQGDSGGPLVQEDTRRLWFVVGIVSWGYQCGLP-NKPGVYTRVTAYRNWI 411

  Fly   261  260
              Rat   412  411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7542NP_648995.3 Tryp_SPc 27..263 CDD:238113 78/241 (32%)
Tmprss11dNP_001028824.2 SEA 48..140 CDD:460188
Tryp_SPc 186..414 CDD:238113 78/241 (32%)
Blue background indicates that the domain is not in the aligned region.

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