DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7542 and zgc:112038

DIOPT Version :10

Sequence 1:NP_648995.3 Gene:CG7542 / 39960 FlyBaseID:FBgn0036738 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_001018482.1 Gene:zgc:112038 / 553673 ZFINID:ZDB-GENE-050522-271 Length:311 Species:Danio rerio


Alignment Length:268 Identity:80/268 - (29%)
Similarity:135/268 - (50%) Gaps:30/268 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VCVLLVGSCTAVPLLTDVEPYITNGEPAEVGQFPYQAGLNVSFGNWSTWCGGTLISHYWIITAAH 70
            :|.|.|  |...||..:     ..|:.|..|.:|:||.:: ........|||:||:..|:::|||
Zfish    21 LCQLDV--CGQAPLNNN-----NGGDDAVAGSWPWQASIH-RISPEDHICGGSLINKDWVLSAAH 77

  Fly    71 C--MDGAESVTVYLG-AINIGDESEEGQERIMVEKSGIIVHSNYMASTVVNDISLIRLPAFVGFT 132
            |  :....::.::|| ....|....|    |....:.|::|.:|..:|..|||:|:||.:.|.||
Zfish    78 CFMITATANIKIFLGRQFQTGSNPNE----ISRTLTQIVIHPDYSTTTQNNDIALLRLSSSVTFT 138

  Fly   133 DRIRAASLPRRLNGQFPTYESI-----RAFASGWGRESDASDSVSPVLRYVEMPIMPHSLCRMYW 192
            |.||...|        .:.:|:     :::.:||.:...:...|:.||:.|::|::.::.|...:
Zfish   139 DYIRPVCL--------ASADSVFAGGTKSWITGWDKHRSSDIQVTNVLQEVQLPVVSNTECNADY 195

  Fly   193 SGAVSEKMICMS-TTSGKSTCHGDSGGPLVYKQGNSSYLIGSTSFGTSMGCQVGFPAVFTRISSY 256
            .|.:::.|||.. ...||..|.||||||:|.:.|:.....|..|||...|.. .:|.::||:|.|
Zfish   196 KGIITDNMICAGINEGGKDACQGDSGGPMVSQNGSRWIQSGIVSFGRECGLP-RYPGIYTRVSQY 259

  Fly   257 LDWILNHI 264
            ..||.:.:
Zfish   260 QSWITSEL 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7542NP_648995.3 Tryp_SPc 27..263 CDD:238113 74/244 (30%)
zgc:112038NP_001018482.1 Tryp_SPc 37..263 CDD:238113 72/239 (30%)

Return to query results.
Submit another query.