DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7542 and CG5390

DIOPT Version :10

Sequence 1:NP_648995.3 Gene:CG7542 / 39960 FlyBaseID:FBgn0036738 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_609374.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster


Alignment Length:247 Identity:68/247 - (27%)
Similarity:117/247 - (47%) Gaps:26/247 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 EPAEVGQFPYQAGLNVSFGNWSTW-CGGTLISHYWIITAAHCMDGAE--SVTVYLGAINIGDESE 92
            :.||.|:||:...:....||.:.: |||.||:...::|||||:...:  |:.|..|..:...::|
  Fly   153 QEAEFGEFPWMLAILREEGNLNLYECGGALIAPNVVLTAAHCVHNKQPSSIVVRAGEWDTQTQTE 217

  Fly    93 --EGQERIMVEKSGIIVHSNYMASTVVNDISLIRLPAFVGFTDRIRAASLPRRLNGQFPTYESIR 155
              ..::|.:.|   ||.|..:...::.||::::.|.:.....:.|:...|| .:..:|   :..|
  Fly   218 IRRHEDRYVKE---IIYHEQFNKGSLYNDVAVMLLESPFTLQENIQTVCLP-NVGDKF---DFDR 275

  Fly   156 AFASGWGRESDASD-SVSPVLRYVEMPIMPHSLC-------RMYWSGAVSEKMICMSTTSGKSTC 212
            .:|:|||:.....| ....:|:.|:||::|...|       |:.....:.:..||......|.||
  Fly   276 CYATGWGKNKFGKDGEYQVILKKVDMPVVPEQQCETNLRETRLGRHFILHDSFICAGGEKDKDTC 340

  Fly   213 HGDSGGPLVYK---QGNSSYLIGSTSFGTSMGC-QVGFPAVFTRISSYLDWI 260
            .||.|.|||..   |.|.....|..::|  :|| :|..|.|:..::....||
  Fly   341 KGDGGSPLVCPIAGQKNRFKSAGIVAWG--IGCGEVNIPGVYASVAKLRPWI 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7542NP_648995.3 Tryp_SPc 27..263 CDD:238113 68/247 (28%)
CG5390NP_609374.1 CLIP_1 64..115 CDD:465709
Tryp_SPc 153..390 CDD:214473 66/245 (27%)
Blue background indicates that the domain is not in the aligned region.

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