DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7542 and psh

DIOPT Version :10

Sequence 1:NP_648995.3 Gene:CG7542 / 39960 FlyBaseID:FBgn0036738 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:259 Identity:74/259 - (28%)
Similarity:125/259 - (48%) Gaps:41/259 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YITNGEPAEVGQFPYQAGLN-VSFGNWSTWCGGTLISHYWIITAAHCM--DGAESVTVYLGAINI 87
            :|..|.|.:.|.:|:.|.:. ::||. ...|||:||:..:::|||||:  |......|.|||:||
  Fly   143 HIVGGYPVDPGVYPHMAAIGYITFGT-DFRCGGSLIASRFVLTAAHCVNTDANTPAFVRLGAVNI 206

  Fly    88 GDESEEGQERIMVEKSGIIVHSNYMASTVVNDISLIRLPAFVGFTDRIRAASLPRRLNGQFPTYE 152
            .:.....|:.::   ..:.:|..|:.:. .|||:::.|...|..||.||.|.|  ..:...|...
  Fly   207 ENPDHSYQDIVI---RSVKIHPQYVGNK-YNDIAILELERDVVETDNIRPACL--HTDATDPPSN 265

  Fly   153 SIRAFASGWGRESDASDSVSPVLRYVEMPIMPHSLCRMYWSG------------------AVSEK 199
            | :.|.:|||..:..:.:.|.:|....:.::|...|.:.::.                  |:.:|
  Fly   266 S-KFFVAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLCAIDQK 329

  Fly   200 MICMSTTSGKSTCHGDSGGPLVYK---QGNSSYLIGSTSFGTSMGCQVGFPAVFTRISSYLDWI 260
            :|.       ..|.|||||||:::   :.....::|..|.|  .||....|.::||:|||||:|
  Fly   330 LIA-------DACKGDSGGPLIHELNVEDGMYTIMGVISSG--FGCATVTPGLYTRVSSYLDFI 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7542NP_648995.3 Tryp_SPc 27..263 CDD:238113 74/258 (29%)
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 74/258 (29%)
Blue background indicates that the domain is not in the aligned region.

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