DRSC/TRiP Functional Genomics Resources

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Protein Alignment sinah and sina

DIOPT Version :10

Sequence 1:NP_648927.1 Gene:sinah / 39885 FlyBaseID:FBgn0259794 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_476725.1 Gene:sina / 39884 FlyBaseID:FBgn0003410 Length:314 Species:Drosophila melanogaster


Alignment Length:333 Identity:156/333 - (46%)
Similarity:207/333 - (62%) Gaps:23/333 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RVSPQRTIDTPTASGEMLTRRQSAPALVVPPEETTHVVVVKRQSPDAAAAGELVPSRRKDSVAVQ 79
            :::|:|...|..|:|        |.|..|....:|        |..:::||.  .|....|.:..
  Fly     4 KINPKRREPTAAAAG--------AGATGVATNTST--------STGSSSAGN--TSSANTSSSSS 50

  Fly    80 SGIVATGPLDTTRSGARDDFLMALLECPVCFGYIMPPIMQCPRGHLICSTCRSKLTICPVCRVFM 144
            |.:.:.|..|   :|...| |.:|.||||||.|::|||:||..|||:|.:||||||.||.||..:
  Fly    51 SSLSSAGGGD---AGMSAD-LTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLTCCPTCRGPL 111

  Fly   145 TNIRSLAMEKVASKLIFPCKHSHFGCRARLSYAEKTKHEEDCECRPYFCPYPDDKCSWQGPLRDV 209
            .|||:||||||||.:.||||||.:||.|.|.|.|||:|||.||||||.||.|...|.|||||..|
  Fly   112 ANIRNLAMEKVASNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLV 176

  Fly   210 YQHLMSSHENVITMEGNDIIFLATNVNLEGALDWTMVQSCHGRHFLLSLEKINLGEDCQQYFTAC 274
            .||||.||:::.|::|.||:||||::||.||:||.|:|||.|.||:|.|||....:..||:|...
  Fly   177 MQHLMMSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQQFFAIV 241

  Fly   275 RMIGSMKDAAEFVYNISLEAYNRTLRWQSKPRSIRENF-SSFTNADFLVLNKHTVELFSEDGNLA 338
            ::|||.|:|..|||.:.|....|.|.|::.||||.|.. |:..|:|.||.:....:||:::|||.
  Fly   242 QLIGSRKEAENFVYRLELNGNRRRLTWEAMPRSIHEGVASAIHNSDCLVFDTSIAQLFADNGNLG 306

  Fly   339 LNVVIRKV 346
            :||.|..|
  Fly   307 INVTISLV 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sinahNP_648927.1 RING_Ubox 102..151 CDD:473075 30/48 (63%)
Sina 147..341 CDD:460824 104/194 (54%)
sinaNP_476725.1 RING_Ubox 68..118 CDD:473075 30/49 (61%)
Sina 114..310 CDD:460824 105/195 (54%)

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