DRSC/TRiP Functional Genomics Resources

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Protein Alignment: sinah and sina

Sequence 1:NP_648927.1 Gene:sinah FlyBaseID:FBgn0259794 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_001287089.1 Gene:sina FlyBaseID:FBgn0003410 Length:314 Species:Drosophila melanogaster

Alignment Length:311 Identity:152/312 (49%)
Similarity:195/312 (63%) Gaps:23/312 (7%)


  Fly    55 KRQSPDAAAAGELV------------------PSRRKDSVAVQSGIVATGPLDTTRSGARDDFLM 101
            ||:.|.|||||...                  .|....|.:..|.:.:.|..|   :|...| |.
  Fly     8 KRREPTAAAAGAGATGVATNTSTSTGSSSAGNTSSANTSSSSSSSLSSAGGGD---AGMSAD-LT 68

  Fly   102 ALLECPVCFGYIMPPIMQCPRGHLICSTCRSKLTICPVCRVFMTNIRSLAMEKVASKLIFPCKHS 166
            :|.||||||.|::|||:||..|||:|.:||||||.||.||..:.|||:||||||||.:.||||||
  Fly    69 SLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLTCCPTCRGPLANIRNLAMEKVASNVKFPCKHS 133

  Fly   167 HFGCRARLSYAEKTKHEEDCECRPYFCPYPDDKCSWQGPLRDVYQHLMSSHENVITMEGNDIIFL 231
            .:||.|.|.|.|||:|||.||||||.||.|...|.|||||..|.||||.||:::.|::|.||:||
  Fly   134 GYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMSHKSITTLQGEDIVFL 198

  Fly   232 ATNVNLEGALDWTMVQSCHGRHFLLSLEKINLGEDCQQYFTACRMIGSMKDAAEFVYNISLEAYN 296
            ||::||.||:||.|:|||.|.||:|.|||....:..||:|...::|||.|:|..|||.:.|....
  Fly   199 ATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQQFFAIVQLIGSRKEAENFVYRLELNGNR 263

  Fly   297 RTLRWQSKPRSIRENF-SSFTNADFLVLNKHTVELFSEDGNLALNVVIRKV 346
            |.|.|::.||||.|.. |:..|:|.||.:....:||:::|||.:||.|..|
  Fly   264 RRLTWEAMPRSIHEGVASAIHNSDCLVFDTSIAQLFADNGNLGINVTISLV 314

Known Domains:


GeneSequenceDomainRegion External IDIdentity
sinahNP_648927.1 zf-C3HC4 106..140 CDD:278524 23/34 (68%)
Sina 147..341 CDD:281181 105/195 (54%)
sinaNP_001287089.1 Sina 114..310 CDD:281181 106/196 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG3002
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 159 1.000 Inparanoid score I1599
Isobase 00.000 Not matched by this tool.
OrthoDB 1 1.010 D780610at2759
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR45877
RoundUp 00.000 Not matched by this tool.
44.060

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