DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9701 and lct

DIOPT Version :9

Sequence 1:NP_648918.1 Gene:CG9701 / 39872 FlyBaseID:FBgn0036659 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_021334700.1 Gene:lct / 796436 ZFINID:ZDB-GENE-081104-434 Length:1898 Species:Danio rerio


Alignment Length:549 Identity:226/549 - (41%)
Similarity:314/549 - (57%) Gaps:47/549 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GSPVSQTR-----RFPNDFLWGVGSSSYQIEGGWNADDKGESIWDFLTHTHPEKIVDRSNGDVSA 76
            |.|::...     .|...|.|...:::|||||.|.||.||.||||..:|| ..||....|||::.
Zfish  1328 GFPITAEEEILYGHFREGFEWSTATAAYQIEGAWRADGKGLSIWDKFSHT-DSKITQDDNGDIAC 1391

  Fly    77 DSYHQWKRDVQMVKELHVGTYRFSLSWPRIMPGGYMNHVSTAGIKYYSNLIDELLRYNITPMVTI 141
            |||::.:.|:.::|.|.|..||||:|||||:|.|....::.||:.||..|.|.||..||.|.||:
Zfish  1392 DSYNKIEEDINVLKTLGVKHYRFSISWPRILPDGTNRKINEAGLDYYHRLTDALLAANIKPQVTL 1456

  Fly   142 YHWELPQKLQELGGWTNPEIIPLFKDYARLVLEMYGDRVKIWTTVNEPWHVCEHGYGVDYMAPSY 206
            |||:|||.||::|||.|..|:..|:|||.:|....|:::|.|.|:|||.:|..||||....||..
Zfish  1457 YHWDLPQALQDVGGWENDTIVDRFRDYADVVFNSLGEKIKFWITLNEPLNVAAHGYGYGSQAPGL 1521

  Fly   207 -NYPGIPAYLCGHNLLKAHAEVVHMYRELFQPRQGGRMGITLDTSWPEPRDPNSAEDREASERAM 270
             :.||...|...|||:|||||..|:|.:.::.:.||.:.:|:::.|.|.|:|...||.:|:.|.:
Zfish  1522 SDSPGTAPYTVAHNLIKAHAEAWHLYNDQYRAKHGGMISLTMNSDWAEARNPYKQEDVDAARRTI 1586

  Fly   271 QFYVGWFGHPIFSKHGNYPKVMIERIRNLSKEQGFGARSRLPEFTTEEIHRIRGTSDFFGINSYT 335
            ||.:|||.||:|.  |:|..:|.:.||..|...|. .:|||||||.||:.||:||.|:||.|.||
Zfish  1587 QFQLGWFAHPVFK--GDYSDLMKDVIRERSLAAGL-PKSRLPEFTPEEVARIKGTHDYFGFNHYT 1648

  Fly   336 SNLVTSNGHNNTGKFPVPSFNHDMG---VVESQEGV------DWPGSGSVWLKVYPKGMYNLLMW 391
            |               |.:||.|.|   .:|:..|.      .|..|||:||||.|.|...:|.:
Zfish  1649 S---------------VLAFNVDYGDQQHIEADRGAGAIRDRTWLDSGSIWLKVAPVGFRKILNF 1698

  Fly   392 IHREYNAPEIIVTENGVSDRG--GLEDYARVDYYNLYLSAVLDA-MEDGANISGYIAWSLMDSYE 453
            |..||..|.:.:||||||::|  .|.|..|:.||..|::..|.| |.||.:|.||.||||||:.|
Zfish  1699 IKEEYGNPPLYITENGVSEQGPENLNDVTRIYYYENYINQALKAYMLDGVDIRGYTAWSLMDNME 1763

  Fly   454 WKAGFSEKFGLYHVDFNSPQRTRTPKISARVFAQLCKTN-TIDWSYRPKLDE----EQQLVAMAQ 513
            |.||::|:|||::|:.:.|...|.||.|...:|.:...| .:....||...|    |..:..:..
Zfish  1764 WAAGYTERFGLFYVNRSDPNFPRIPKKSVWSYATIVSCNGFLSPEERPHKCEVHEPEDDIPGITT 1828

  Fly   514 LP---AEARTS--GASGAVSWSLMGILLL 537
            ||   .|...|  |...:||.:.:|:.:|
Zfish  1829 LPPPVEELSVSFLGLEVSVSNAELGLNVL 1857

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG9701NP_648918.1 Glyco_hydro_1 22..492 CDD:304882 210/487 (43%)
lctXP_021334700.1 Glyco_hydro_1 66..>164 CDD:329037
Glyco_hydro_1 344..810 CDD:329037