DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C2 and COR1

DIOPT Version :10

Sequence 1:NP_648905.1 Gene:UQCR-C2 / 39846 FlyBaseID:FBgn0250814 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_009508.1 Gene:COR1 / 852235 SGDID:S000000141 Length:457 Species:Saccharomyces cerevisiae


Alignment Length:484 Identity:114/484 - (23%)
Similarity:198/484 - (40%) Gaps:113/484 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NASKTSLLRAIAKRGYATCPRPVGDLSAVNVKVLENKLVVATA-DATLPVSRVSLVLGAGSRNES 67
            |..|.||..|:|      .|:       ..|..|.|.:||||. :.:...:.|.:|.|:|:.||:
Yeast    12 NQFKRSLATAVA------TPK-------AEVTQLSNGIVVATEHNPSAHTASVGVVFGSGAANEN 63

  Fly    68 YDIQGASHLLRLAGGLSTQNST-----AFAIARNIQQVGGTLTTWGDRELVGYTVTTTADNAETG 127
            ....|.|:|.:.. .||.:||.     ..|::.||           .|:...|.|::...:.:..
Yeast    64 PYNNGVSNLWKNI-FLSKENSAVAAKEGLALSSNI-----------SRDFQSYIVSSLPGSTDKS 116

  Fly   128 LRYL-QDLLQPAFKPWELVDNA------KTVVNQLNAVSTEE---RAIELVHKAAFRNGLGNSIY 182
            |.:| |..:|   :...|:.::      |:|:.|:......:   |.:|.:|..||:|   ..:.
Yeast   117 LDFLNQSFIQ---QKANLLSSSNFEATKKSVLKQVQDFEENDHPNRVLEHLHSTAFQN---TPLS 175

  Fly   183 SPRFQLGKLSS-ESLLHYVAQTFA-----AGRAAVVGVG----------IDNNTLAGFAQTLQFP 231
            .|  ..|.|.| |:|:....::||     ...|.|||.|          |::..|:  .||...|
Yeast   176 LP--TRGTLESLENLVVADLESFANNHFLNSNAVVVGTGNIKHEDLVNSIESKNLS--LQTGTKP 236

  Fly   232 SGGSKAASANWYGGDAR-KDTSGHRAVVAVAGQGAAASNHKEALAFAILEQALGAKAATKRGTSA 295
            ....|||   :.|.:.| :|.:..:|.:::|.:|...::....:          ||.|.:...|.
Yeast   237 VLKKKAA---FLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFV----------AKLAAQIFGSY 288

  Fly   296 GLFGEAVNCAGGVGASVKAV---------------NASYSDAGLFGFVVSADSKDIGKTVEFLVR 345
            ..|..|....|     :|.:               :.||.|:||:||  |..::::....:.:..
Yeast   289 NAFEPASRLQG-----IKLLDNIQEYQLCDNFNHFSLSYKDSGLWGF--STATRNVTMIDDLIHF 346

  Fly   346 GLK-----SASVSDKDVARGKALLKARIISRYSSDGGLIKE---IGRQAALTRNVLEADALLGAI 402
            .||     :.||:|.:|.|.|:|||.::...|.| |..:.:   :|.:..:..:.|........|
Yeast   347 TLKQWNRLTISVTDTEVERAKSLLKLQLGQLYES-GNPVNDANLLGAEVLIKGSKLSLGEAFKKI 410

  Fly   403 DGISQSQVQE-AAKKVGSSKLAVGAIGHL 430
            |.|:...|:. |.|::....:|:...|.:
Yeast   411 DAITVKDVKAWAGKRLWDQDIAIAGTGQI 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C2NP_648905.1 PqqL 23..428 CDD:440377 107/461 (23%)
COR1NP_009508.1 PqqL 17..434 CDD:440377 111/472 (24%)

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