DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C2 and uqcrc1

DIOPT Version :10

Sequence 1:NP_648905.1 Gene:UQCR-C2 / 39846 FlyBaseID:FBgn0250814 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001016710.1 Gene:uqcrc1 / 549464 XenbaseID:XB-GENE-5905304 Length:478 Species:Xenopus tropicalis


Alignment Length:475 Identity:108/475 - (22%)
Similarity:195/475 - (41%) Gaps:59/475 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CNASKT---SLLRAIA------KRGYATCP--RPVGDLSAVNVKVLENKLVVATADATLPVSRVS 56
            |.|..:   :||||.:      :|..:..|  |.|.::....:..|.|.|.||:.::......|.
 Frog     6 CRAGSSVGKALLRARSPALLNPQRNGSAVPYARAVQNIPETQISSLANGLRVASEESGQATCTVG 70

  Fly    57 LVLGAGSRNESYDIQGASHLLRLAGGLSTQNSTAFAIARNIQQVGGTLTTWGDRELVGYTVTTTA 121
            :.:|.|||.|:....||.:.|.......|:.....|:.:.::.:|..|..:..||.....:...:
 Frog    71 VWIGTGSRYENDKNNGAGYFLEHLAFKGTKKRPQAALEQEVESLGAHLNAYTTREQTAIYIKAQS 135

  Fly   122 DNAETGLRYLQDLLQP-AFKPWELVDNAKTVVNQLNAVST--EERAIELVHKAAFR-NGLGNSIY 182
            .:....:..|.|::|. :.:..::......::.::..:.:  :|...:.:|..|:: ..||.::.
 Frog   136 QDLPKAVEILADVVQNCSLEDSQIEKERHVILREMQEIDSNLQEVVFDYLHATAYQGTALGRTVV 200

  Fly   183 SPRFQLGKLSSESLLHYVAQTFAAGRAAVVGV-GIDNNTLAGFAQTLQFPSGGS----KAA---- 238
            .|.....:|:...|:.||:..|.|.|..:... |:::..|...||  :..||.|    |.|    
 Frog   201 GPSENARRLNRADLVDYVSSHFKAPRMVLAAAGGVNHKELCDLAQ--RHFSGLSYEYEKDAVPLL 263

  Fly   239 -SANWYGGD--ARKD--TSGHRAVVAVAGQGAAASNHKEALAFAILEQALGAKAATKRGTSAGLF 298
             ...:.|.:  ||.|  ...|.| :||.|.|   .|..:.:...:....:|:...|        :
 Frog   264 PPCRFTGSEIRARNDDLPLAHLA-IAVEGPG---WNSSDNIPLLVANAIVGSYHVT--------Y 316

  Fly   299 GEAVNCAGGVGASVKA----------VNASYSDAGLFGFVVSADSKDIGKTVEFLVRG---LKSA 350
            |...|.:..| |||.|          .:..|||.||||.....|..:| :.:..:.:|   ....
 Frog   317 GGGKNLSSRV-ASVAAEHKLCQSFQPFHIRYSDTGLFGLHFVTDRHNI-EDMLHIAQGEWMRLCT 379

  Fly   351 SVSDKDVARGKALLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALLGAIDGISQSQVQEAAK 415
            .|:|.:||:.|..||..::::......:.::||||.......:..:.|...||.:|..:|.|...
 Frog   380 GVTDSEVAQAKNALKTALLAQLDGTTPVCEDIGRQVLTLGQRISLEELNARIDAVSAKKVSEICS 444

  Fly   416 KVGSSKL-AVGAIGHLANVP 434
            |....|. ||..:|.:..:|
 Frog   445 KYLYDKCPAVAGVGPIEQIP 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C2NP_648905.1 PqqL 23..428 CDD:440377 99/438 (23%)
uqcrc1NP_001016710.1 PqqL 35..464 CDD:440377 100/444 (23%)

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